RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 ZNF559Q9BR84 538 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 TTYH2Q9BSA4 534 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 DPH5Q9H2P9 285 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 WDR41Q9HAD4 459 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 SH2D2AQ9NP31 389 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 ZFP64Q9NPA5 681 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 ACKR4Q9NPB9 350 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 PNPLA3Q9NST1 481 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 LYARQ9NX58 379 aaKnown RBP10.94□□□□□ -0.66
SPARC-206ENST00000524277 TNFRSF10DQ9UBN6 386 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 B4GALT7Q9UBV7 327 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 TNPO3Q9Y5L0 923 aaKnown RBP10.94□□□□□ -0.66
SPARC-206ENST00000524277 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.94□□□□□ -0.66
SPARC-206ENST00000524277 CELSR1Q9NYQ6 3014 aa10.94□□□□□ -0.66
SPARC-206ENST00000524277 PHF3Q92576 2039 aaKnown RBP10.94□□□□□ -0.66
SPARC-206ENST00000524277 TRGV5A0A0B4J1U4 118 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 NKX2-6A6NCS4 301 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 H0YIV9 168 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 RTCAO00442 366 aaKnown RBP10.93□□□□□ -0.66
SPARC-206ENST00000524277 PROM1O43490 865 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 RAD51CO43502 376 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 FGF17O60258 216 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 KLK8O60259 260 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 GPR75O95800 540 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 C1QAP02745 245 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 CCL3P10147 92 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 MAGEA4P43358 317 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 ALDH18A1P54886 795 aaKnown RBP10.93□□□□□ -0.66
SPARC-206ENST00000524277 GPX6P59796 221 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 KRTAP10-9P60411 292 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 CUL3Q13618 768 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 SLMAPQ14BN4 828 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 ACAP2Q15057 778 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 SF3B4Q15427 424 aaKnown RBP eCLIP10.93□□□□□ -0.66
SPARC-206ENST00000524277 C10orf62Q5T681 223 aaPredicted RBP10.93□□□□□ -0.66
SPARC-206ENST00000524277 ZNF585AQ6P3V2 769 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 KLC3Q6P597 504 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 CCDC71Q8IV32 467 aaPredicted RBP10.93□□□□□ -0.66
SPARC-206ENST00000524277 TAGAPQ8N103 731 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 FBXW8Q8N3Y1 598 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 PPM1NQ8N819 430 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 ZNF321PQ8N8H1 164 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 OR5M9Q8NGP3 310 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 EXT2Q93063 718 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 LRRC46Q96FV0 321 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 UCK2Q9BZX2 261 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 OR51B5Q9H339 312 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 EXO5Q9H790 373 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 DDX31Q9H8H2 851 aaKnown RBP10.93□□□□□ -0.66
SPARC-206ENST00000524277 NPDC1Q9NQX5 325 aaPredicted RBP10.93□□□□□ -0.66
SPARC-206ENST00000524277 IGSF5Q9NSI5 407 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 TUBA8Q9NY65 449 aaPredicted RBP10.93□□□□□ -0.66
SPARC-206ENST00000524277 GRHL1Q9NZI5 618 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 EDARQ9UNE0 448 aa10.93□□□□□ -0.66
SPARC-206ENST00000524277 A0A0G2JMM0 328 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 MYOCOSA0A1B0GUC4 107 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 ATP6AP2A0A1C7CYW4 349 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 A0A1W2PPB8 328 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 A0A1W2PRS3 328 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 ANKRD33BA6NCL7 494 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 KIR3DP1A8MWS1 328 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 UBXN8O00124 270 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 FOXE1O00358 373 aaPredicted RBP10.92□□□□□ -0.66
SPARC-206ENST00000524277 TP53I11O14683 189 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 OR10H2O60403 315 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 ATP6AP2O75787 350 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 FBXO45P0C2W1 286 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 SLC35E2P0CK97 266 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 GLI4P10075 376 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 DNASE1L1P49184 302 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 PLTPP55058 493 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 KCNJ2P63252 427 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 RPP38P78345 283 aaKnown RBP10.92□□□□□ -0.66
SPARC-206ENST00000524277 ID2Q02363 134 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 FOLH1Q04609 750 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 SETDB1Q15047 1291 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 PCBP2Q15366 365 aaKnown RBP eCLIP10.92□□□□□ -0.66
SPARC-206ENST00000524277 C1orf185Q5T7R7 199 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 RIPPLY2Q5TAB7 128 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 CYP20A1Q6UW02 462 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 RNF111Q6ZNA4 994 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 OR4N5Q8IXE1 308 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 C9orf40Q8IXQ3 194 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 TEX9Q8N6V9 391 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 FBF1Q8TES7 1133 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 RIT1Q92963 219 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 TP53INP1Q96A56 240 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 NXNL1Q96CM4 212 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 SECISBP2Q96T21 854 aaKnown RBP10.92□□□□□ -0.66
SPARC-206ENST00000524277 ACTR8Q9H981 624 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 DMRT3Q9NQL9 472 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 TMCO1Q9UM00 188 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 IKBKGQ9Y6K9 419 aa10.92□□□□□ -0.66
SPARC-206ENST00000524277 HSPB2A8KAH6 182 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 AHRRA9YTQ3 701 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 G3V3Y1 287 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 SAP18O00422 153 aaKnown RBP10.91□□□□□ -0.66
SPARC-206ENST00000524277 PLPP1O14494 284 aa10.91□□□□□ -0.66
SPARC-206ENST00000524277 ZNF354AO60765 605 aaPredicted RBP10.91□□□□□ -0.66
SPARC-206ENST00000524277 CDH16O75309 829 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms