RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 PLIN5Q00G26 463 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 OC90Q02509 493 aaPredicted RBP16.6■□□□□ 0.25
CLK4-211ENST00000522556 OR52E8Q6IFG1 317 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 EXOC3L1Q86VI1 746 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 LGI4Q8N135 537 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 ARMC10Q8N2F6 343 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 PKNOX2Q96KN3 472 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 SMC6Q96SB8 1091 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 UTP23Q9BRU9 249 aaKnown RBP16.6■□□□□ 0.25
CLK4-211ENST00000522556 AHSPQ9NZD4 102 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 STK38LQ9Y2H1 464 aa16.6■□□□□ 0.25
CLK4-211ENST00000522556 EML6Q6ZMW3 1958 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 WWP2O00308 870 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 RGS16O15492 202 aaPredicted RBP16.59■□□□□ 0.25
CLK4-211ENST00000522556 ITGA10O75578 1167 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 IGKV3-11P04433 115 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 HK2P52789 917 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 ERVK-8P63133 956 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 MPP2Q14168 576 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 TNFAIP8L3Q5GJ75 292 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 ZNF766Q5HY98 468 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 PAGE2Q7Z2X7 111 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 C9orf40Q8IXQ3 194 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 GALNT11Q8NCW6 608 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 MORN4Q8NDC4 146 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 DAZLQ92904 295 aaKnown RBP16.59■□□□□ 0.25
CLK4-211ENST00000522556 C11orf24Q96F05 449 aaPredicted RBP16.59■□□□□ 0.25
CLK4-211ENST00000522556 SENP5Q96HI0 755 aaPredicted RBP16.59■□□□□ 0.25
CLK4-211ENST00000522556 CNPPD1Q9BV87 410 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 CENPHQ9H3R5 247 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 TUBB1Q9H4B7 451 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 LRFN1Q9P244 771 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 MID2Q9UJV3 735 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 CES1P1Q9UKY3 287 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 ERVK-19Q9WJR5 959 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 CCL27Q9Y4X3 112 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 PCDHA9Q9Y5H5 950 aa16.59■□□□□ 0.25
CLK4-211ENST00000522556 SVILO95425 2214 aa16.58■□□□□ 0.25
CLK4-211ENST00000522556 PRRC2CQ9Y520 2896 aaKnown RBP16.58■□□□□ 0.25
CLK4-211ENST00000522556 PCDH7O60245 1069 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 OR10H2O60403 315 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 VPS4BO75351 444 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 OR2J2O76002 312 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 ZFAND5O76080 213 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 IL3P08700 152 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 TIA1P31483 386 aaKnown RBP eCLIP16.58■□□□□ 0.24
CLK4-211ENST00000522556 SOX18P35713 384 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 PRSS53Q2L4Q9 553 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 ATCAYQ86WG3 371 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 ST13P4Q8IZP2 240 aaPredicted RBP16.58■□□□□ 0.24
CLK4-211ENST00000522556 OR2T11Q8NH01 316 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 AGR3Q8TD06 166 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 SCMH1Q96GD3 660 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 WDR41Q9HAD4 459 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 ABI3Q9P2A4 366 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 MCM8Q9UJA3 840 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 VPS4AQ9UN37 437 aa16.58■□□□□ 0.24
CLK4-211ENST00000522556 ESPL1Q14674 2120 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 CROCCQ5TZA2 2017 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 CRCPO75575 148 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 CBX6O95503 412 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 RNF224P0DH78 156 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 MST1P26927 711 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 SSTR4P31391 388 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 ALDH9A1P49189 494 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 RNF4P78317 190 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 ZNF267Q14586 743 aaPredicted RBP16.57■□□□□ 0.24
CLK4-211ENST00000522556 EIF2S3LQ2VIR3 472 aaKnown RBP16.57■□□□□ 0.24
CLK4-211ENST00000522556 ARL13AQ5H913 290 aaPredicted RBP16.57■□□□□ 0.24
CLK4-211ENST00000522556 BEND6Q5SZJ8 279 aaPredicted RBP16.57■□□□□ 0.24
CLK4-211ENST00000522556 ZNF324BQ6AW86 544 aaPredicted RBP16.57■□□□□ 0.24
CLK4-211ENST00000522556 RPUSD3Q6P087 351 aaKnown RBP16.57■□□□□ 0.24
CLK4-211ENST00000522556 SLC48A1Q6P1K1 146 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 FAM180AQ6UWF9 173 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 HSDL2Q6YN16 418 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 GALNTL5Q7Z4T8 443 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 MDGA2Q7Z553 956 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 GBP7Q8N8V2 638 aaPredicted RBP16.57■□□□□ 0.24
CLK4-211ENST00000522556 SIMC1Q8NDZ2 872 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 FAR1Q8WVX9 515 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 FBXL20Q96IG2 436 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 RASL10BQ96S79 203 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 RRAGDQ9NQL2 400 aaPredicted RBP16.57■□□□□ 0.24
CLK4-211ENST00000522556 MYOTQ9UBF9 498 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 DLGAP4Q9Y2H0 992 aa16.57■□□□□ 0.24
CLK4-211ENST00000522556 POLR3HQ9Y535 204 aaPredicted RBP16.57■□□□□ 0.24
CLK4-211ENST00000522556 SERTM1A2A2V5 107 aa16.56■□□□□ 0.24
CLK4-211ENST00000522556 WDR91A4D1P6 747 aa16.56■□□□□ 0.24
CLK4-211ENST00000522556 SLC25A12O75746 678 aa16.56■□□□□ 0.24
CLK4-211ENST00000522556 OR6B1O95007 311 aa16.56■□□□□ 0.24
CLK4-211ENST00000522556 BPGMP07738 259 aa16.56■□□□□ 0.24
CLK4-211ENST00000522556 SLC35E2P0CK97 266 aa16.56■□□□□ 0.24
CLK4-211ENST00000522556 UROSP10746 265 aa16.56■□□□□ 0.24
CLK4-211ENST00000522556 COX7A2P14406 83 aa16.56■□□□□ 0.24
CLK4-211ENST00000522556 PIK3R1P27986 724 aa16.56■□□□□ 0.24
CLK4-211ENST00000522556 TRHRP34981 398 aaPredicted RBP16.56■□□□□ 0.24
CLK4-211ENST00000522556 FEN1P39748 380 aaKnown RBP16.56■□□□□ 0.24
CLK4-211ENST00000522556 SOX3P41225 446 aa16.56■□□□□ 0.24
CLK4-211ENST00000522556 HLCSP50747 726 aa16.56■□□□□ 0.24
CLK4-211ENST00000522556 XKP51811 444 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms