RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 H2AFJQ9BTM1 129 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 UGT2B28Q9BY64 529 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 PCBD2Q9H0N5 130 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 PCDHAC1Q9H158 963 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 NOL11Q9H8H0 719 aaKnown RBP6.45□□□□□ -1.38
SPIDR-218ENST00000522222 PALMDQ9NP74 551 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 SLC22A11Q9NSA0 550 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 TBCCD1Q9NVR7 557 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 IFT80Q9P2H3 777 aaPredicted RBP6.45□□□□□ -1.38
SPIDR-218ENST00000522222 CTSFQ9UBX1 484 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 NDOR1Q9UHB4 597 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 TCFL5Q9UL49 500 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 AURKCQ9UQB9 309 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 POLHQ9Y253 713 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 FARSAQ9Y285 508 aaKnown RBP6.45□□□□□ -1.38
SPIDR-218ENST00000522222 MAN2B2Q9Y2E5 1009 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 PADI2Q9Y2J8 665 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 OARD1Q9Y530 152 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 PCDHA9Q9Y5H5 950 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 GPR45Q9Y5Y3 372 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 CEPT1Q9Y6K0 416 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 PCSK5Q92824 1860 aa6.45□□□□□ -1.38
SPIDR-218ENST00000522222 SMG1Q96Q15 3661 aaKnown RBP6.45□□□□□ -1.38
SPIDR-218ENST00000522222 C7orf72A4D263 438 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 H7BY64 318 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 FXYD1O00168 92 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 SLC28A1O00337 649 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 CLOCKO15516 846 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 SRPX2O60687 465 aaPredicted RBP6.44□□□□□ -1.38
SPIDR-218ENST00000522222 TIPRLO75663 272 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 ALBP02768 609 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 RAP2AP10114 183 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 MTHFD2P13995 350 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 ETS2P15036 469 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 CAPN3P20807 821 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 JAK1P23458 1154 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 HMOX2P30519 316 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 BCL6P41182 706 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 OR1D4P47884 311 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 GSK3BP49841 420 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 POLR2JP52435 117 aaKnown RBP6.44□□□□□ -1.38
SPIDR-218ENST00000522222 HNRNPFP52597 415 aaKnown RBP6.44□□□□□ -1.38
SPIDR-218ENST00000522222 ARSFP54793 590 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 PRSS12P56730 875 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 SNRPNP63162 240 aaKnown RBP6.44□□□□□ -1.38
SPIDR-218ENST00000522222 CSNK1G2P78368 415 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 REEP5Q00765 189 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 EMX2Q04743 252 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 CHAF1BQ13112 559 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 KCNAB2Q13303 367 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 TOP3AQ13472 1001 aaPredicted RBP6.44□□□□□ -1.38
SPIDR-218ENST00000522222 IL18R1Q13478 541 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 ATP1A4Q13733 1029 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 MYBPC3Q14896 1274 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 PCBP2Q15366 365 aaKnown RBP eCLIP6.44□□□□□ -1.382e-6■■■■□ 25.4
SPIDR-218ENST00000522222 OR4D1Q15615 310 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 RBBP7Q16576 425 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 CYP51A1Q16850 503 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 HKDC1Q2TB90 917 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 C18orf21Q32NC0 220 aaPredicted RBP6.44□□□□□ -1.38
SPIDR-218ENST00000522222 RFX4Q33E94 735 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 CDKL4Q5MAI5 379 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 RBM48Q5RL73 367 aaKnown RBP6.44□□□□□ -1.38
SPIDR-218ENST00000522222 CCNYL2Q5T2Q4 361 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 MLIPQ5VWP3 458 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 TTC23Q5W5X9 447 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 HMBOX1Q6NT76 420 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 FBXO42Q6P3S6 717 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 LCTLQ6UWM7 567 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 CYP2R1Q6VVX0 501 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 LINC00299Q6ZSB3 139 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 VN1R4Q7Z5H5 301 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 MRGPREQ86SM8 312 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 TMPRSS11BQ86T26 416 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 GPSM1Q86YR5 675 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 ADGRG5Q8IZF4 528 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 SVOPLQ8N434 492 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 ARHGEF39Q8N4T4 335 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 CBR4Q8N4T8 237 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 FAM47BQ8NA70 645 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 LSM14AQ8ND56 463 aaKnown RBP6.44□□□□□ -1.38
SPIDR-218ENST00000522222 FAM156AQ8NDB6 213 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 ADAMTS17Q8TE56 1095 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 APOBEC4Q8WW27 367 aaKnown RBP6.44□□□□□ -1.38
SPIDR-218ENST00000522222 ATL1Q8WXF7 558 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 EXT2Q93063 718 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 RERGQ96A58 199 aaPredicted RBP6.44□□□□□ -1.38
SPIDR-218ENST00000522222 TMEM125Q96AQ2 219 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 FKBP10Q96AY3 582 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 NSMCE2Q96MF7 247 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 PRAP1Q96NZ9 151 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 OR2A5Q96R48 311 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 EGFL8Q99944 293 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 C17orf62Q9BQA9 187 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 BCL7BQ9BQE9 202 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 FAM117AQ9C073 453 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 SEMA6AQ9H2E6 1030 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 SPNS1Q9H2V7 528 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 PLGRKTQ9HBL7 147 aa6.44□□□□□ -1.38
SPIDR-218ENST00000522222 OLAHQ9NV23 265 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms