RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 FAM71E1Q6IPT2 247 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 ANKRD54Q6NXT1 300 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 ZNF438Q7Z4V0 828 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 IQCHQ86VS3 1027 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 CCDC103Q8IW40 242 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 ETFBKMTQ8IXQ9 262 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 ART5Q96L15 291 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 MS4A8Q9BY19 250 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 FBXL21Q9UKT6 434 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 CYP8B1Q9UNU6 501 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 WDR37Q9Y2I8 494 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 H0Y8X5 98 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 C21orf33P30042 268 aaPredicted RBP9.65□□□□□ -0.86
MCF2-209ENST00000520602 WNT3P56703 355 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 NCS1P62166 190 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 CTBSQ01459 385 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 MAD2L1BPQ15013 274 aaPredicted RBP9.65□□□□□ -0.86
MCF2-209ENST00000520602 CTU2Q2VPK5 515 aaKnown RBP9.65□□□□□ -0.86
MCF2-209ENST00000520602 ZNF750Q32MQ0 723 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 PIP5KL1Q5T9C9 394 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 KIAA1161Q6NSJ0 714 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 KLHL35Q6PF15 583 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 SMARCD3Q6STE5 483 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 FCRL4Q96PJ5 515 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 PLA2G2FQ9BZM2 168 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 MCOLN1Q9GZU1 580 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 DCSTAMPQ9H295 470 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 GIN1Q9NXP7 522 aa9.65□□□□□ -0.86
MCF2-209ENST00000520602 URB1O60287 2271 aaKnown RBP9.65□□□□□ -0.87
MCF2-209ENST00000520602 CXorf51AA0A1B0GTR3 108 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 POM121BA6NF01 834 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 FAM227AF5H4B4 570 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 YY2O15391 372 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 PRAMEF10O60809 474 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 HMGN2P05204 90 aaKnown RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 BMP7P18075 431 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 TAS2R38P59533 333 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 LEXMQ3ZCV2 418 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 B3GNT8Q7Z7M8 397 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 PEX5LQ8IYB4 626 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 COX18Q8N8Q8 333 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 NUP43Q8NFH3 380 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 SLC38A5Q8WUX1 472 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 TM4SF18Q96CE8 201 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 VWCEQ96DN2 955 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 C1GALT1C1Q96EU7 318 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 AHCYL2Q96HN2 611 aaKnown RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 MBOAT4Q96T53 435 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 MAPKAP1Q9BPZ7 522 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 MKLN1Q9UL63 735 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 TSPAN11A1L157 253 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 SLC22A1O15245 554 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 LCMT2O60294 686 aaKnown RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 BCAS1O75363 584 aaPredicted RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 CKMT1AP12532 417 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 IL1RNP18510 177 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 TPP2P29144 1249 aaPredicted RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 CNR2P34972 360 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 MAGEA10P43363 369 aaPredicted RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 MLLT10P55197 1068 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 DEFA1P59665 94 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 DEFA3P59666 94 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 CSNK1G2P78368 415 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 SLC13A2Q13183 592 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 ZNHIT3Q15649 155 aaPredicted RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 MICAQ29983 383 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 KIAA1211LQ6NV74 962 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 ASPGQ86U10 573 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 RPLP0P6Q8NHW5 317 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 TMEM203Q969S6 136 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 COQ8BQ96D53 544 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 ITPAQ9BY32 194 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 FGF22Q9HCT0 170 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 POLMQ9NP87 494 aaPredicted RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 TMEM184CQ9NVA4 438 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 EHD3Q9NZN3 535 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 NDUFAF4Q9P032 175 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 TAAR2Q9P1P5 351 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 SNX11Q9Y5W9 270 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 BRWD1Q9NSI6 2320 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 GNB5O14775 395 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 SEMA3DO95025 777 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 SAGP10523 405 aaPredicted RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 DRD2P14416 443 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 RAE1P78406 368 aaKnown RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 ABATP80404 500 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 ZNF155Q12901 538 aaPredicted RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 RPE65Q16518 533 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 DUSP7Q16829 419 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 CALHM3Q86XJ0 350 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 SYNPOQ8N3V7 929 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 POC5Q8NA72 575 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 CAMKVQ8NCB2 501 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 RBM18Q96H35 190 aaKnown RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 CNPPD1Q9BV87 410 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 POLR2J2Q9GZM3 115 aaKnown RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 NMNAT1Q9HAN9 279 aaPredicted RBP9.64□□□□□ -0.87
MCF2-209ENST00000520602 NLRC5Q86WI3 1866 aa9.64□□□□□ -0.87
MCF2-209ENST00000520602 C1orf226A1L170 272 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 TMX2-CTNND1H3BSU7 103 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms