RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 CNPPD1Q9BV87 410 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PRDM14Q9GZV8 571 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 SYNPO2LQ9H987 977 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 YAE1D1Q9NRH1 226 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 GALNT8Q9NY28 637 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 PSD3Q9NYI0 1048 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 SPRR3Q9UBC9 169 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 SAE1Q9UBE0 346 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 SOX13Q9UN79 622 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 RRP15Q9Y3B9 282 aaKnown RBP4.49□□□□□ -1.69
SDCBP-207ENST00000520168 ATG4BQ9Y4P1 393 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 MMACHCQ9Y4U1 282 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 SAR1BQ9Y6B6 198 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 USF3Q68DE3 2245 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 EXPH5Q8NEV8 1989 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 NINQ8N4C6 2090 aa4.49□□□□□ -1.69
SDCBP-207ENST00000520168 C15orf38-AP3S2A0A0A6YYH1 394 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 CCDC162PA2VCL2 907 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 OR51F1A6NGY5 319 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 ERI2A8K979 691 aaKnown RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 E7ENX8 843 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 H3BMM5 538 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 H7BY64 318 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 H7C0C1 242 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 SLC16A5O15375 505 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 B4GALT2O60909 372 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 MYO1DO94832 1006 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 OR6B1O95007 311 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 BAG2O95816 211 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 SLC16A8O95907 504 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 GOT2P00505 430 aaKnown RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 CELA3AP09093 270 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 TMEM253P0C7T8 217 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 TMIGD3P0DMS9 266 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 RNH1P13489 461 aaKnown RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 H2AFXP16104 143 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 PCSK2P16519 638 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 TCP1P17987 556 aaKnown RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 ALOX12P18054 663 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 CCND1P24385 295 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 RBL1P28749 1068 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 IDUAP35475 653 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 SOX3P41225 446 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 PAFAH1B1P43034 410 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 ATP5OP48047 213 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 NR0B1P51843 470 aaKnown RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 GTF2A1P52655 376 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 MTTPP55157 894 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 KCNJ2P63252 427 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 TAP2Q03519 686 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 ACVR1Q04771 509 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 RGS1Q08116 209 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 CRYZQ08257 329 aaKnown RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 CDH17Q12864 832 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 GAB1Q13480 694 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 VEZF1Q14119 521 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 CAPRIN1Q14444 709 aaKnown RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 RPS6KA1Q15418 735 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 CLEC12BQ2HXU8 276 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 TYSND1Q2T9J0 566 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 CCSMST1Q4G0I0 132 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 NHSL2Q5HYW2 709 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 LIPNQ5VXI9 398 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 AP1ARQ63HQ0 302 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 SLC22A10Q63ZE4 541 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 HSDL2Q6YN16 418 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 SYDE1Q6ZW31 735 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 STRA8Q7Z7C7 330 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 SNX32Q86XE0 403 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 CPNE8Q86YQ8 564 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 SHISA5Q8N114 240 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 LRRC25Q8N386 305 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 TMEM132CQ8N3T6 1108 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 RASGEF1CQ8N431 466 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 ZNF441Q8N8Z8 693 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 ANKRD42Q8N9B4 389 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 OR5L2Q8NGL0 311 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 OR13J1Q8NGT2 312 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 GABPB2Q8TAK5 448 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 ZCCHC10Q8TBK6 192 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 ZPLD1Q8TCW7 415 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 LKAAEAR1Q8TD35 194 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 IGFBPL1Q8WX77 278 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 DAZLQ92904 295 aaKnown RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 CAVIN3Q969G5 261 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 NCLNQ969V3 563 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 ZBED6CLQ96FA7 236 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 PIK3IP1Q96FE7 263 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 RSRC1Q96IZ7 334 aaKnown RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 PRAP1Q96NZ9 151 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 TCF12Q99081 682 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 TACO1Q9BSH4 297 aaKnown RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 MED18Q9BUE0 208 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 BEX2Q9BXY8 128 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 REG4Q9BYZ8 158 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 EPB41L4BQ9H329 900 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 ADAP2Q9NPF8 381 aa4.48□□□□□ -1.69
SDCBP-207ENST00000520168 CCDC177Q9NQR7 707 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-207ENST00000520168 TUBA8Q9NY65 449 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms