RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 NOXRED1Q6NXP6 359 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 TRIM42Q8IWZ5 723 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 ZNF843Q8N446 348 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 B3GNT7Q8NFL0 401 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 OR2T11Q8NH01 316 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 DNAJB14Q8TBM8 379 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 DYDC1Q8WWB3 177 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 KLHL29Q96CT2 875 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 CNPPD1Q9BV87 410 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 C20orf27Q9GZN8 174 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 CDCP1Q9H5V8 836 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 MAP10Q9P2G4 905 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 GIMAP2Q9UG22 337 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 RAP2CQ9Y3L5 183 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 CLDN16Q9Y5I7 305 aa16.06■□□□□ 0.16
CLK4-204ENST00000520126 FAM208BQ5VWN6 2430 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 A0A1W2PS29 197 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 DYTNA2CJ06 578 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 SYNDIG1LA6NDD5 238 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 HMGB1P1B2RPK0 211 aaPredicted RBP16.05■□□□□ 0.16
CLK4-204ENST00000520126 PEX11AO75192 247 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 KITP10721 976 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 NT5EP21589 574 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 RPL14P50914 215 aaKnown RBP16.05■□□□□ 0.16
CLK4-204ENST00000520126 ZNF267Q14586 743 aaPredicted RBP16.05■□□□□ 0.16
CLK4-204ENST00000520126 HEPACAMQ14CZ8 416 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 ATG16L1Q676U5 607 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 Q6ZSR9 355 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 HOMEZQ8IX15 550 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 SLC5A8Q8N695 610 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 NFAM1Q8NET5 270 aaPredicted RBP16.05■□□□□ 0.16
CLK4-204ENST00000520126 OR6Y1Q8NGX8 325 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 OR14A16Q8NHC5 309 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 PTPMT1Q8WUK0 201 aaPredicted RBP16.05■□□□□ 0.16
CLK4-204ENST00000520126 PSMF1Q92530 271 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 RIT1Q92963 219 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 EXOSC8Q96B26 276 aaKnown RBP16.05■□□□□ 0.16
CLK4-204ENST00000520126 VMP1Q96GC9 406 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 ZNF354BQ96LW1 612 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLK4-204ENST00000520126 MANSC1Q9H8J5 431 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 LIN28AQ9H9Z2 209 aaKnown RBP16.05■□□□□ 0.16
CLK4-204ENST00000520126 ABI3Q9P2A4 366 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 COPS7AQ9UBW8 275 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 UTS2RQ9UKP6 389 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 ZNF780BQ9Y6R6 833 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 CACNA1GO43497 2377 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 ATMQ13315 3056 aa16.05■□□□□ 0.16
CLK4-204ENST00000520126 CHD6Q8TD26 2715 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 C1QL1O75973 258 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 PTGER1P34995 402 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 CD97P48960 835 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 SLC18A1P54219 525 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 ZNF763Q0D2J5 394 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 BIKQ13323 160 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 MFAP5Q13361 173 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 MEP1AQ16819 746 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 UGT3A2Q3SY77 523 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 SLC48A1Q6P1K1 146 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 DGAT2L6Q6ZPD8 337 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 RPS19BP1Q86WX3 136 aaKnown RBP16.04■□□□□ 0.16
CLK4-204ENST00000520126 CRLF3Q8IUI8 442 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 ST13P4Q8IZP2 240 aaPredicted RBP16.04■□□□□ 0.16
CLK4-204ENST00000520126 ZNF321PQ8N8H1 164 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 C7orf57Q8NEG2 295 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 GFM2Q969S9 779 aaKnown RBP16.04■□□□□ 0.16
CLK4-204ENST00000520126 TUBGCP3Q96CW5 907 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 LMF1Q96S06 567 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 SH3GL2Q99962 352 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 SLAMF7Q9NQ25 335 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 MIEF1Q9NQG6 463 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 PNPOQ9NVS9 261 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 ANKRD10Q9NXR5 420 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 HEY2Q9UBP5 337 aa16.04■□□□□ 0.16
CLK4-204ENST00000520126 B8ZZF3 427 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 LRATO95237 230 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 PORP16435 677 aaPredicted RBP16.03■□□□□ 0.16
CLK4-204ENST00000520126 ERVK-8P63133 956 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 OC90Q02509 493 aaPredicted RBP16.03■□□□□ 0.16
CLK4-204ENST00000520126 ATP6AP1LQ52LC2 224 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 RFTN2Q52LD8 501 aaPredicted RBP16.03■□□□□ 0.16
CLK4-204ENST00000520126 ACER2Q5QJU3 275 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 BEST3Q8N1M1 668 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 RBMXL3Q8N7X1 1067 aaKnown RBP16.03■□□□□ 0.16
CLK4-204ENST00000520126 MORN4Q8NDC4 146 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 CATSPER1Q8NEC5 780 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 CLHC1Q8NHS4 586 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 SLC2A12Q8TD20 617 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 ELP5Q8TE02 316 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 C19orf60Q96EN9 201 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 SENP5Q96HI0 755 aaPredicted RBP16.03■□□□□ 0.16
CLK4-204ENST00000520126 PPP3R2Q96LZ3 170 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 C3orf30Q96M34 536 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 TSSK3Q96PN8 268 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 SORT1Q99523 831 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 PELOQ9BRX2 385 aaKnown RBP16.03■□□□□ 0.16
CLK4-204ENST00000520126 C1orf50Q9BV19 199 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 BRINP2Q9C0B6 783 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 GIMAP4Q9NUV9 329 aa16.03■□□□□ 0.16
CLK4-204ENST00000520126 MARCOQ9UEW3 520 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms