RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 NRIP1P48552 1158 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 ALDH9A1P49189 494 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 ATP1A2P50993 1020 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 TOP3AQ13472 1001 aaPredicted RBP4.98□□□□□ -1.61
AP3B1-204ENST00000519295 GAB1Q13480 694 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 KNOP1Q1ED39 458 aaKnown RBP4.98□□□□□ -1.61
AP3B1-204ENST00000519295 FAM214AQ32MH5 1076 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 FAM74A3Q4VXF1 159 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 EFHC2Q5JST6 749 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 TCHHL1Q5QJ38 904 aaPredicted RBP4.98□□□□□ -1.61
AP3B1-204ENST00000519295 SH3PXD2AQ5TCZ1 1133 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 TMEM108Q6UXF1 575 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 GDPD4Q6W3E5 623 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 RAD9BQ6WBX8 426 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 CILP2Q8IUL8 1156 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 UBQLNLQ8IYU4 475 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 BBS1Q8NFJ9 593 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 RAB1CQ92928 201 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 FBXL8Q96CD0 374 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 SH3YL1Q96HL8 342 aaPredicted RBP4.98□□□□□ -1.61
AP3B1-204ENST00000519295 SMIM8Q96KF7 97 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 FIZ1Q96SL8 496 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 COPS4Q9BT78 406 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 DDX31Q9H8H2 851 aaKnown RBP4.98□□□□□ -1.61
AP3B1-204ENST00000519295 TCFL5Q9UL49 500 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 PACSIN2Q9UNF0 486 aaPredicted RBP4.98□□□□□ -1.61
AP3B1-204ENST00000519295 BDP1A6H8Y1 2624 aa4.98□□□□□ -1.61
AP3B1-204ENST00000519295 MYOCOSA0A1B0GUC4 107 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 EREGO14944 169 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 KDELR3O43731 214 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 DCTN3O75935 186 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 LY86O95711 162 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 RBP1P09455 135 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 SAGP10523 405 aaPredicted RBP4.97□□□□□ -1.61
AP3B1-204ENST00000519295 CLUP10909 449 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 NQO2P16083 231 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 MAS1LP35410 378 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 NAMPTP43490 491 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 HLCSP50747 726 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 ERVK-25P63136 954 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 FGD3Q5JSP0 725 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 C10orf91Q5T1B1 145 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 ATXN7L2Q5T6C5 722 aaPredicted RBP4.97□□□□□ -1.61
AP3B1-204ENST00000519295 SLC22A15Q8IZD6 547 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 GRPEL2Q8TAA5 225 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 SAP25Q8TEE9 199 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 XAGE5Q8WWM1 108 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 SNAPC3Q92966 411 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 TMEM186Q96B77 213 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 NEIL1Q96FI4 390 aaPredicted RBP4.97□□□□□ -1.61
AP3B1-204ENST00000519295 SIPA1Q96FS4 1042 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 ADAM2Q99965 735 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 C1QTNF2Q9BXJ5 285 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 CNOT10Q9H9A5 744 aaKnown RBP4.97□□□□□ -1.61
AP3B1-204ENST00000519295 TBC1D23Q9NUY8 699 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 OLAHQ9NV23 265 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 CLDND1Q9NY35 253 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 LHX6Q9UPM6 363 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 MROH6A6NGR9 719 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 DDX3XO00571 662 aaKnown RBP eCLIP4.97□□□□□ -1.611e-12■■■■□ 21.7
AP3B1-204ENST00000519295 CCSO14618 274 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 TLX2O43763 284 aaPredicted RBP4.97□□□□□ -1.61
AP3B1-204ENST00000519295 NPHS1O60500 1241 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 CDC14BO60729 498 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 NR3C1P04150 777 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 ZNF883P0CG24 379 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 ITGA3P26006 1051 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 IL1R2P27930 398 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 ITPKBP27987 946 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 C21orf33P30042 268 aaPredicted RBP4.97□□□□□ -1.61
AP3B1-204ENST00000519295 ID1P41134 155 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 ERVK11-1P61568 191 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 IL5RAQ01344 420 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 MAPK7Q13164 816 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 EFNB3Q15768 340 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 REP15Q6BDI9 236 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 MED25Q71SY5 747 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 ARPINQ7Z6K5 226 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 TRABD2AQ86V40 505 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 SVOPLQ8N434 492 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 D2HGDHQ8N465 521 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 AP2M1Q96CW1 435 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 CD180Q99467 661 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 PIGUQ9H490 435 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 GCM1Q9NP62 436 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 SLC2A9Q9NRM0 540 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 SLC23A1Q9UHI7 598 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 TSPAN16Q9UKR8 245 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 CAMK2AQ9UQM7 478 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 KCNE2Q9Y6J6 123 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 SF3B1O75533 1304 aaKnown RBP eCLIP4.97□□□□□ -1.611e-6■■■■■ 107
AP3B1-204ENST00000519295 URADA6NGE7 173 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 ZNF99A8MXY4 864 aaPredicted RBP4.97□□□□□ -1.61
AP3B1-204ENST00000519295 MAN2B1O00754 1011 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 INPP4BO15327 924 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 CALUO43852 315 aaPredicted RBP4.97□□□□□ -1.61
AP3B1-204ENST00000519295 SUSD5O60279 629 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 GABRA1P14867 456 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 HLA-GP17693 338 aa4.97□□□□□ -1.61
AP3B1-204ENST00000519295 CSRP1P21291 193 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms