RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ZNF98A6NK75 572 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 A8MUA0 341 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 LEUTXA8MZ59 168 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 GABRDO14764 452 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 DNTTP04053 509 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 HEXAP06865 529 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 CSF1P09603 554 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 NR2F1P10589 423 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 GOT1P17174 413 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 NBL1P41271 181 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 SP4Q02446 784 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 CDC20Q12834 499 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 GAGE2BQ13066 116 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 SRSF6Q13247 344 aaKnown RBP-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 MVPQ14764 893 aaKnown RBP-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 RPS6KA2Q15349 733 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 GLYR1Q49A26 553 aaPredicted RBP-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 GAGE2EQ4V326 116 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 ZNF805Q5CZA5 627 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 GRTP1Q5TC63 336 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 DGAT2L7PQ6IED9 249 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 GAGE2AQ6NT46 116 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 TMPPEQ6ZT21 453 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 C6orf120Q7Z4R8 191 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 SDCCAG8Q86SQ7 713 aaPredicted RBP-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 TADA2BQ86TJ2 420 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 CCDC71Q8IV32 467 aaPredicted RBP-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 PCP2Q8IVA1 136 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 CNTN4Q8IWV2 1026 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 FAM86B1Q8N7N1 296 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 MAGEB6Q8N7X4 407 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 SAMD12Q8N8I0 201 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 SLC43A3Q8NBI5 491 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 NEIL2Q969S2 332 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 L3HYPDHQ96EM0 354 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 PIWIL1Q96J94 861 aaKnown RBP-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 WFIKKN1Q96NZ8 548 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 TTTY12Q9BZ98 90 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 LMAN2LQ9H0V9 348 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 PIGMQ9H3S5 423 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 DHX35Q9H5Z1 703 aaKnown RBP-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 EPHX3Q9H6B9 360 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 MAGIXQ9H6Y5 334 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 UBQLN4Q9NRR5 601 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 TMLHEQ9NVH6 421 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 GAGE2DQ9UEU5 116 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 ATG4BQ9Y4P1 393 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 ACANP16112 2415 aa-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 MAP1AP78559 2803 aaPredicted RBP-1.77□□□□□ -2.69
SNORA40.16-201ENST00000517238 EML5Q05BV3 1969 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 ATG2BQ96BY7 2078 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 IGHV3OR16-12A0A075B7B8 117 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 A0A087WZ39 114 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 TRBV5-5A0A0J9YX44 114 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 A0A1B0GUH1 482 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 UBXN8O00124 270 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 ZFYP08048 801 aaPredicted RBP-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 HSPA8P11142 646 aaKnown RBP-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 SERPINA4P29622 427 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 PPP2R1BP30154 601 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 GLP1RP43220 463 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 RECQLP46063 649 aaPredicted RBP-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 EFNB2P52799 333 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 C2orf54Q08AI8 447 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 ST3GAL4Q11206 333 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 PNRC1Q12796 327 aaPredicted RBP-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 DUSP5Q16690 384 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 MEP1AQ16819 746 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 TRIM60Q495X7 471 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 FGD3Q5JSP0 725 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 ELFN2Q5R3F8 820 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 BEND5Q7L4P6 421 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 GALNT13Q8IUC8 556 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 CHCHD4Q8N4Q1 142 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 Q8N976 141 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 NECAP1Q8NC96 275 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 CATSPER1Q8NEC5 780 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 CCDC107Q8WV48 283 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 TFB1MQ8WVM0 346 aaKnown RBP-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 CREB3L1Q96BA8 519 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 RRNAD1Q96FB5 475 aaKnown RBP-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 DUS3LQ96G46 650 aaKnown RBP-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 C20orf166-AS1Q96NR2 134 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 ELOVL4Q9GZR5 314 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 PUS7LQ9H0K6 701 aaKnown RBP-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 XKR8Q9H6D3 395 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 PLEKHA2Q9HB19 425 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 TRPV4Q9HBA0 871 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 NEK6Q9HC98 313 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 ZFP14Q9HCL3 533 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 HHATLQ9HCP6 504 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 MED4Q9NPJ6 270 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 NANSQ9NR45 359 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 UBA2Q9UBT2 640 aaPredicted RBP-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 OR12D3Q9UGF7 316 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 DDX20Q9UHI6 824 aaKnown RBP-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 ATP6V1HQ9UI12 483 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 DNPEPQ9ULA0 475 aa-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 RRP7AQ9Y3A4 280 aaKnown RBP-1.78□□□□□ -2.69
SNORA40.16-201ENST00000517238 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP-1.78□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms