RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 PCDHGB3Q9Y5G1 929 aa13.48□□□□□ -0.25
SCARNA20.5-201ENST00000516991 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.48□□□□□ -0.25
SCARNA20.5-201ENST00000516991 CCDC189A1A4V9 331 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 SYCE1LA8MT33 242 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 ZNF354AO60765 605 aaPredicted RBP13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 ZWINTO95229 277 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 LTA4HP09960 611 aaKnown RBP13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 ALOX15P16050 662 aaPredicted RBP13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 EPB42P16452 691 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 CRABP2P29373 138 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 PEX19P40855 299 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 BUD31P41223 144 aaPredicted RBP13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 FOLH1Q04609 750 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 SLAMF1Q13291 335 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 SLMAPQ14BN4 828 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 SPRED3Q2MJR0 410 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 RIPPLY2Q5TAB7 128 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 C3orf62Q6ZUJ4 267 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 RAPH1Q70E73 1250 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 SLC29A4Q7RTT9 530 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 MAATS1Q7Z4T9 603 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 CCDC91Q7Z6B0 441 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 GPR180Q86V85 440 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 C9orf40Q8IXQ3 194 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 ST13P4Q8IZP2 240 aaPredicted RBP13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 ATOH8Q96SQ7 321 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 ERP44Q9BS26 406 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 DPH5Q9H2P9 285 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 OR51B5Q9H339 312 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 ZFP64Q9NPA5 681 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 DMRT3Q9NQL9 472 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 TSC22D4Q9Y3Q8 395 aa13.47□□□□□ -0.25
SCARNA20.5-201ENST00000516991 ARHGAP21Q5T5U3 1957 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 A0A0G2JNJ9 132 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 IQANK1A0A1B0GTG1 560 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 OR6C76A6NM76 312 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 OR10H2O60403 315 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 NADKO95544 446 aaPredicted RBP13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 CELA3AP09093 270 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 FBXO45P0C2W1 286 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 SLC35E2BP0CK96 405 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 STX2P32856 288 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 PIGAP37287 484 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 ART1P52961 327 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 DDX39BQ13838 428 aaKnown RBP13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 TBCELQ5QJ74 424 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 RTL6Q6ICC9 239 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 RNF111Q6ZNA4 994 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 ISCA2Q86U28 154 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 LRRC25Q8N386 305 aaPredicted RBP13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 FAM13CQ8NE31 585 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 HUS1BQ8NHY5 278 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 REPS1Q96D71 796 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 CNPPD1Q9BV87 410 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 LYARQ9NX58 379 aaKnown RBP13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 Q9UFV3 132 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 L3MBTL1Q9Y468 752 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 ANGPTL3Q9Y5C1 460 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 PCDHGA11Q9Y5H2 935 aa13.46□□□□□ -0.25
SCARNA20.5-201ENST00000516991 UBXN8O00124 270 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SAP18O00422 153 aaKnown RBP13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PLPP1O14494 284 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 UGDHO60701 494 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SH3BGRLO75368 114 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 C1QAP02745 245 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 NR2F6P10588 404 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SERPINB3P29508 390 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GALNSP34059 522 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 HERVK_113P63132 956 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ERVK-8P63133 956 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CAV1Q03135 178 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 KBTBD12Q3ZCT8 623 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 LIPJQ5W064 366 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ADGRD1Q6QNK2 874 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 LYPD8Q6UX82 237 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 MYLK4Q86YV6 388 aaPredicted RBP13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 OR4N5Q8IXE1 308 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 LIX1Q8N485 282 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 TEX9Q8N6V9 391 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PPM1NQ8N819 430 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 RHEBL1Q8TAI7 183 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 NEIL3Q8TAT5 605 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 NINJ1Q92982 152 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 LRRC46Q96FV0 321 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ZNF597Q96LX8 424 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GAL3ST4Q96RP7 486 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ERVK-6Q9BXR3 956 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 WWTR1Q9GZV5 400 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 WDR41Q9HAD4 459 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ACKR4Q9NPB9 350 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SEMA4BQ9NPR2 832 aaPredicted RBP13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 SPRR3Q9UBC9 169 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ERVK-19Q9WJR5 959 aa13.45□□□□□ -0.26
SCARNA20.5-201ENST00000516991 LRRC3CA6NJW4 275 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 HSPB2A8KAH6 182 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 CAPN14A8MX76 684 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 GPR75O95800 540 aa13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 ENDOUP21128 410 aaKnown RBP13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 PTX3P26022 381 aaPredicted RBP13.44□□□□□ -0.26
SCARNA20.5-201ENST00000516991 DNAJA1P31689 397 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms