RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CDH17Q12864 832 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 RALGDSQ12967 914 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 SNX1Q13596 522 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 ITGA9Q13797 1035 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 DHX34Q14147 1143 aaKnown RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 FRG1Q14331 258 aaKnown RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 RAB35Q15286 201 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 RBBP5Q15291 538 aaKnown RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 TAF11Q15544 211 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 MUM1Q2TAK8 710 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 SIRPB2Q5JXA9 342 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 ACER2Q5QJU3 275 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 PHYHD1Q5SRE7 291 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 HENMT1Q5T8I9 393 aaKnown RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 SAXO2Q658L1 398 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 LRRC66Q68CR7 880 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 FCRLBQ6BAA4 426 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 AADACL2Q6P093 401 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 FAHD2BQ6P2I3 314 aaPredicted RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 LRRC8BQ6P9F7 803 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 C16orf87Q6PH81 154 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 CNSTQ6PJW8 725 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 CCDC137Q6PK04 289 aaKnown RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 PPP1R21Q6ZMI0 780 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 RGS9BPQ6ZS82 235 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 C22orf34Q6ZV56 151 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 CYS1Q717R9 158 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 GSTA5Q7RTV2 222 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 OVCH1Q7RTY7 1134 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 SPATA21Q7Z572 469 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 CPLX4Q7Z7G2 160 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 EXOC3L1Q86VI1 746 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 COMTD1Q86VU5 262 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 ZSWIM9Q86XI8 627 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 LMNTD2Q8IXW0 634 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 TRAM1L1Q8N609 369 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 TEX29Q8N6K0 151 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 TEX9Q8N6V9 391 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 HORMAD2Q8N7B1 307 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 PAF1Q8N7H5 531 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 C19orf47Q8N9M1 422 aaKnown RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 BBOF1Q8ND07 529 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 FAM13CQ8NE31 585 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 LPCAT1Q8NF37 534 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 SPATA22Q8NHS9 363 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 M1APQ8TC57 530 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 FBXO25Q8TCJ0 367 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 STYXQ8WUJ0 223 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 C10orf82Q8WW14 230 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 C1orf54Q8WWF1 131 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 NRG4Q8WWG1 115 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 ASZ1Q8WWH4 475 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 CFHR4Q92496 578 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 NEUROG1Q92886 237 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 ABTB1Q969K4 478 aaPredicted RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 AP2M1Q96CW1 435 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 SLC7A6OSQ96CW6 309 aaPredicted RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 LRRC39Q96DD0 335 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 DTD2Q96FN9 168 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 FAHD2AQ96GK7 314 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 OXNAD1Q96HP4 312 aaPredicted RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 COX14Q96I36 57 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 FAM210AQ96ND0 272 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 TMEM237Q96Q45 408 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 VPS35Q96QK1 796 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 TTC1Q99614 292 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 TBL1YQ9BQ87 522 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 SELENOSQ9BQE4 189 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 ERP44Q9BS26 406 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 NAT9Q9BTE0 207 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 NTMT1Q9BV86 223 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 CACNG6Q9BXT2 260 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 IL22Q9GZX6 179 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 NSRP1Q9H0G5 558 aaKnown RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 MYLK2Q9H1R3 596 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 FAM83DQ9H4H8 585 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 SOX17Q9H6I2 414 aaPredicted RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 ASB8Q9H765 288 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 CNTD2Q9H8S5 307 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 ETNK1Q9HBU6 452 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 TRIM39Q9HCM9 518 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 XAB2Q9HCS7 855 aaKnown RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 IL26Q9NPH9 171 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 INTS9Q9NV88 658 aaKnown RBP2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 FGFR1OP2Q9NVK5 253 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 SMOXQ9NWM0 555 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 SOHLH2Q9NX45 425 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 PKD2L2Q9NZM6 624 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 C1RLQ9NZP8 487 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 BFARQ9NZS9 450 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 CHKBQ9Y259 395 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 ARL2BPQ9Y2Y0 163 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 PKP3Q9Y446 797 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 TTLL3Q9Y4R7 772 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 CORINQ9Y5Q5 1042 aa2.86□□□□□ -1.95
SCARNA13-201ENST00000516672 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
SCARNA13-201ENST00000516672 IGLV3-16A0A075B6K0 115 aa2.85□□□□□ -1.95
SCARNA13-201ENST00000516672 TRBV5-4A0A0C4DH59 114 aa2.85□□□□□ -1.95
SCARNA13-201ENST00000516672 C1orf232A0A0U1RR37 186 aa2.85□□□□□ -1.95
SCARNA13-201ENST00000516672 A0A1W2PQ72 361 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms