RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 RSPH9Q9H1X1 276 aaPredicted RBP5.08□□□□□ -1.6
SNORA48.9-201ENST00000516419 TMEM245Q9H330 911 aa5.08□□□□□ -1.6
SNORA48.9-201ENST00000516419 NT5DC2Q9H857 520 aa5.08□□□□□ -1.6
SNORA48.9-201ENST00000516419 HMG20BQ9P0W2 317 aa5.08□□□□□ -1.6
SNORA48.9-201ENST00000516419 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.08□□□□□ -1.6
SNORA48.9-201ENST00000516419 MRPS2Q9Y399 296 aaKnown RBP5.08□□□□□ -1.6
SNORA48.9-201ENST00000516419 SH3PXD2BA1X283 911 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 DDX39AO00148 427 aaKnown RBP5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 KERAO60938 352 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 PDGFBP01127 241 aaPredicted RBP5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 HLA-DPA1P20036 260 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 FCARP24071 287 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 SPRP35270 261 aaPredicted RBP5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 PTGER3P43115 390 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 MTIF2P46199 727 aaKnown RBP5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 SLC12A3P55017 1021 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 GEMP55040 296 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 HERV-K104P63124 156 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 CDKL1Q00532 357 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 UBXN1Q04323 297 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 P2RY14Q15391 338 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 TRADDQ15628 312 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 HFEQ30201 348 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 DDI2Q5TDH0 399 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 AGAP7PQ5VUJ5 663 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 LYG1Q8N1E2 194 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 ZNRF1Q8ND25 227 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 SLCO4A1Q96BD0 722 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 C16orf58Q96GQ5 468 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 FUNDC2Q9BWH2 189 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 PUS3Q9BZE2 481 aaKnown RBP5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 LIME1Q9H400 295 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 PRMT8Q9NR22 394 aaPredicted RBP5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 CYP39A1Q9NYL5 469 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 AKAP7Q9P0M2 348 aaPredicted RBP5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 TSPAN16Q9UKR8 245 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 CPQQ9Y646 472 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 STYXL1Q9Y6J8 313 aa5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 COL2A1P02458 1487 aaPredicted RBP5.07□□□□□ -1.6
SNORA48.9-201ENST00000516419 A0A0U1RQG5 324 aaPredicted RBP5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 RPL37AP8A6NKH3 93 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 CHEK1O14757 476 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 ATP6V1G1O75348 118 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 BAG2O95816 211 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 OLFM2O95897 454 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 MT-ND1P03886 318 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 ZNF18P17022 549 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 NSFP46459 744 aaKnown RBP5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 ZFP36L1Q07352 338 aaKnown RBP5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 EPC2Q52LR7 807 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 RTL6Q6ICC9 239 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 LRRC49Q8IUZ0 686 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 PARP8Q8N3A8 854 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 SAMD12Q8N8I0 201 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 BEST4Q8NFU0 473 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 OR1K1Q8NGR3 316 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 ATP6V0A1Q93050 837 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 MRPL53Q96EL3 112 aaKnown RBP5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 RPGRIP1Q96KN7 1286 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 FOXN4Q96NZ1 517 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 NAP1L3Q99457 506 aaPredicted RBP5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 DCTN5Q9BTE1 182 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 RPP25Q9BUL9 199 aaKnown RBP5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 DPEP3Q9H4B8 488 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 PIGVQ9NUD9 493 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 MMP24Q9Y5R2 645 aa5.06□□□□□ -1.6
SNORA48.9-201ENST00000516419 A0A1B0GTH9 108 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 MEI4A8MW99 385 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 DUSP11O75319 330 aaKnown RBP5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 HCKP08631 526 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 OR9G9P0C7N8 305 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 MBL2P11226 248 aaPredicted RBP5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 AREGP15514 252 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 DSCR10P59022 87 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 KRTAP10-7P60409 375 aaPredicted RBP5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 ITPK1Q13572 414 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 CCL14Q16627 93 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 HIGD2BQ4VC39 106 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 ERC1Q8IUD2 1116 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 PNPLA2Q96AD5 504 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 GPR137Q96N19 417 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 ATP6V0BQ99437 205 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 ACAT2Q9BWD1 397 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 TRPV6Q9H1D0 765 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 KCNMB3Q9NPA1 279 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 VPS54Q9P1Q0 977 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 APPL1Q9UKG1 709 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 ZNF346Q9UL40 294 aaKnown RBP5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 DIMT1Q9UNQ2 313 aaKnown RBP5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 TDRKHQ9Y2W6 561 aaKnown RBP5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 FBXO7Q9Y3I1 522 aa5.05□□□□□ -1.6
SNORA48.9-201ENST00000516419 RNF212BA8MTL3 300 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 EEF2KO00418 725 aaKnown RBP5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 VEGFDO43915 354 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 TSPAN2O60636 221 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 SEMA4FO95754 770 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 FCER2P06734 321 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 P4HA1P13674 534 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 FOLR2P14207 255 aa5.04□□□□□ -1.6
SNORA48.9-201ENST00000516419 FOSL2P15408 326 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms