RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 TRIM13O60858 407 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 VPS4BO75351 444 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 WISP2O76076 250 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 F10P00742 488 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 SP1P08047 785 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 FGF4P08620 206 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 NR2F6P10588 404 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 EDN3P14138 238 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 ALOX15P16050 662 aaPredicted RBP9.02□□□□□ -0.97
RNF4-221ENST00000513643 PRPH2P23942 346 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 RNF4P78317 190 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 ID2Q02363 134 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 MGAT2Q10469 447 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 FUT7Q11130 342 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 KIAA0040Q15053 153 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 OR1C1Q15619 314 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 CEBPEQ15744 281 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 MPEG1Q2M385 716 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 UGT3A2Q3SY77 523 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 SGO1Q5FBB7 561 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 PIGGQ5H8A4 983 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 ZNF766Q5HY98 468 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 CCNYL2Q5T2Q4 361 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 NDUFAF5Q5TEU4 345 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 OR52E8Q6IFG1 317 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 SLC25A25Q6KCM7 469 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 SLC48A1Q6P1K1 146 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 CYP20A1Q6UW02 462 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 EFCAB3Q8N7B9 438 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 ZNF441Q8N8Z8 693 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 NUBPLQ8TB37 319 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 PPWD1Q96BP3 646 aaKnown RBP9.02□□□□□ -0.97
RNF4-221ENST00000513643 CTHRC1Q96CG8 243 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 APIPQ96GX9 242 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 FBXL20Q96IG2 436 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 ZNF681Q96N22 645 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 KCNA7Q96RP8 456 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 HBEGFQ99075 208 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 UTP23Q9BRU9 249 aaKnown RBP9.02□□□□□ -0.97
RNF4-221ENST00000513643 PELOQ9BRX2 385 aaKnown RBP9.02□□□□□ -0.97
RNF4-221ENST00000513643 TRMOQ9BU70 441 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 SSU72Q9NP77 194 aaKnown RBP9.02□□□□□ -0.97
RNF4-221ENST00000513643 MID1IP1Q9NPA3 183 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 AGPAT4Q9NRZ5 378 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 NMRK1Q9NWW6 199 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 MAP10Q9P2G4 905 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 SLC17A7Q9P2U7 560 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 MCM8Q9UJA3 840 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 VPS4AQ9UN37 437 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 SLC12A4Q9UP95 1085 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 YARS2Q9Y2Z4 477 aaKnown RBP9.02□□□□□ -0.97
RNF4-221ENST00000513643 TIMM22Q9Y584 194 aa9.02□□□□□ -0.97
RNF4-221ENST00000513643 NBPF19A0A087WUL8 3843 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 ZGRF1Q86YA3 2104 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 C1orf226A1L170 272 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 GLOD5A6NK44 160 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 NME2P1O60361 137 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 ITGA10O75578 1167 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 NADKO95544 446 aaPredicted RBP9.01□□□□□ -0.97
RNF4-221ENST00000513643 IFNA16P05015 189 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 DHRS4L1P0CG22 281 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 NME2P22392 152 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 MST1P26927 711 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 ALDH3A1P30838 453 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 ARRB2P32121 409 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 CYB561P49447 251 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 HK2P52789 917 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 MAPK12P53778 367 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 SLC37A1P57057 533 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 MRPL49Q13405 166 aaKnown RBP9.01□□□□□ -0.97
RNF4-221ENST00000513643 UBAP2LQ14157 1087 aaKnown RBP9.01□□□□□ -0.97
RNF4-221ENST00000513643 NR6A1Q15406 480 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 LYPD8Q6UX82 237 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 HSDL2Q6YN16 418 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 C16orf47Q6ZP98 133 aaPredicted RBP9.01□□□□□ -0.97
RNF4-221ENST00000513643 Q6ZSR9 355 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 EXOC3L1Q86VI1 746 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 SIAH3Q8IW03 269 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 C9orf40Q8IXQ3 194 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 GPALPP1Q8IXQ4 340 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 SRRM1Q8IYB3 904 aaKnown RBP9.01□□□□□ -0.97
RNF4-221ENST00000513643 C1orf52Q8N6N3 182 aaKnown RBP9.01□□□□□ -0.97
RNF4-221ENST00000513643 CCNYL1Q8N7R7 359 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 BCORP1Q8N888 145 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 ZNF615Q8N8J6 731 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 FAM76AQ8TAV0 307 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 TCP10LQ8TDR4 215 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 NR4A3Q92570 626 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 NTNG2Q96CW9 530 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 RBM18Q96H35 190 aaKnown RBP9.01□□□□□ -0.97
RNF4-221ENST00000513643 METTL2AQ96IZ6 378 aaKnown RBP9.01□□□□□ -0.97
RNF4-221ENST00000513643 DGAT2Q96PD7 388 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 RASL10BQ96S79 203 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 HES7Q9BYE0 225 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.01□□□□□ -0.97
RNF4-221ENST00000513643 TUBB1Q9H4B7 451 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 CXorf21Q9HAI6 301 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 SH2D2AQ9NP31 389 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 ANKRD10Q9NXR5 420 aa9.01□□□□□ -0.97
RNF4-221ENST00000513643 TAS2R7Q9NYW3 318 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms