RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CDK2AP2O75956 126 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 B3GAT3O94766 335 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 TGDSO95455 350 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 PRSS56P0CW18 603 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 SLC2A2P11168 524 aaPredicted RBP3.76□□□□□ -1.81
HTT-210ENST00000512909 HOXB8P17481 243 aaPredicted RBP3.76□□□□□ -1.81
HTT-210ENST00000512909 NMT1P30419 496 aaKnown RBP3.76□□□□□ -1.81
HTT-210ENST00000512909 SSTR1P30872 391 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 RASGEF1BQ0VAM2 473 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 CETN1Q12798 172 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 TUBB2AQ13885 445 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 DCAF4L1Q3SXM0 396 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 PPM1LQ5SGD2 360 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 MPP7Q5T2T1 576 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 WLSQ5T9L3 541 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 C15orf39Q6ZRI6 1047 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 C1orf186Q6ZWK4 172 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 SMIM29Q86T20 159 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 PIGZQ86VD9 579 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 KIRREL3Q8IZU9 778 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 NUP93Q8N1F7 819 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 PRSS35Q8N3Z0 413 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 BMPERQ8N8U9 685 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 NHLRC2Q8NBF2 726 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 ATAD1Q8NBU5 361 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 SLC37A3Q8NCC5 494 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 OR6S1Q8NH40 331 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 DYRK2Q92630 601 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 ST6GALNAC6Q969X2 333 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 ZNF524Q96C55 264 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 MAP3K3Q99759 626 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 TUBB2BQ9BVA1 445 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 DNAI2Q9GZS0 605 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 CXCL16Q9H2A7 254 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 MMADHCQ9H3L0 296 aaPredicted RBP3.76□□□□□ -1.81
HTT-210ENST00000512909 MFSD1Q9H3U5 465 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 PANK4Q9NVE7 773 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 EPHA6Q9UF33 1036 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 MUTYHQ9UIF7 546 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 ADAM28Q9UKQ2 775 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 CFAP45Q9UL16 551 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 CDH7Q9ULB5 785 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 NCKAP1Q9Y2A7 1128 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 WDR37Q9Y2I8 494 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 SCN10AQ9Y5Y9 1956 aa3.76□□□□□ -1.81
HTT-210ENST00000512909 TRIOBPQ9H2D6 2365 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 GOLGA8IPA6NC78 632 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 GOLGA8JA6NMD2 632 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ANKRD63C9JTQ0 380 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 PRR23D1E9PI22 279 aaPredicted RBP3.75□□□□□ -1.81
HTT-210ENST00000512909 F8VVB4 439 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 F8VWA3 439 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 SLC33A1O00400 549 aaPredicted RBP3.75□□□□□ -1.81
HTT-210ENST00000512909 PRRG1O14668 218 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ZNF263O14978 683 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 CCL16O15467 120 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 TEX28O15482 410 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 GRID2O43424 1007 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 DCXO43602 365 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 SOCS5O75159 536 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 TOM1L1O75674 476 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 PLGP00747 810 aaPredicted RBP3.75□□□□□ -1.81
HTT-210ENST00000512909 SERPING1P05155 500 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 SP1P08047 785 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 PRR23D2P0DMB1 279 aaPredicted RBP3.75□□□□□ -1.81
HTT-210ENST00000512909 MCF2P10911 925 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 GLULP15104 373 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 OR1D2P34982 312 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 BRCC3P46736 316 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ACOT2P49753 483 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ELAVL2Q12926 359 aaKnown RBP3.75□□□□□ -1.81
HTT-210ENST00000512909 PSMD5Q16401 504 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ANKRD20A4Q4UJ75 823 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ANKRD20A8PQ5CZ79 823 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ANKRD20A2Q5SQ80 823 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 LIN9Q5TKA1 542 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ANKRD20A1Q5TYW2 823 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ANKRD20A3Q5VUR7 823 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 FAM46CQ5VWP2 391 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ARMCX5Q6P1M9 558 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 TMEM207Q6UWW9 146 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 TMEM182Q6ZP80 229 aaPredicted RBP3.75□□□□□ -1.81
HTT-210ENST00000512909 CCDC73Q6ZRK6 1079 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 FCRLAQ7L513 359 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 HOGA1Q86XE5 327 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 CCDC65Q8IXS2 484 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 CLYBLQ8N0X4 340 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ELMOD1Q8N336 334 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 C10orf53Q8N6V4 93 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 KLHDC1Q8N7A1 406 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 NKAIN3Q8N8D7 197 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 GBP7Q8N8V2 638 aaPredicted RBP3.75□□□□□ -1.81
HTT-210ENST00000512909 VN1R2Q8NFZ6 395 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 OR4C3Q8NH37 302 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 HPSE2Q8WWQ2 592 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 RIT1Q92963 219 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 C18orf25Q96B23 403 aaPredicted RBP3.75□□□□□ -1.81
HTT-210ENST00000512909 C4orf45Q96LM5 186 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 ACCSQ96QU6 501 aa3.75□□□□□ -1.81
HTT-210ENST00000512909 USP28Q96RU2 1077 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms