RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 SLC6A12P48065 614 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 KCNC1P48547 511 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 PGGT1BP53609 377 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 PLA2G16P53816 162 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 MTTPP55157 894 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 RIPPLY3P57055 190 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 ATP6V0D1P61421 351 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 PPIAP62937 165 aaKnown RBP6.67□□□□□ -1.34
USP46-208ENST00000512656 PLGLB1Q02325 96 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 TLE4Q04727 773 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 STX4Q12846 297 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 PDIA2Q13087 525 aaKnown RBP6.67□□□□□ -1.34
USP46-208ENST00000512656 LAPTM5Q13571 262 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 RUNX2Q13950 521 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 SERTAD2Q14140 314 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 ZNF460Q14592 562 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 TGFBIQ15582 683 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 TSNQ15631 228 aaKnown RBP6.67□□□□□ -1.34
USP46-208ENST00000512656 CMPK2Q5EBM0 449 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 HSDL2Q6YN16 418 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 C3P1Q6ZMU1 363 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 SLC22A16Q86VW1 577 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 GPSM1Q86YR5 675 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 CHERPQ8IWX8 916 aaKnown RBP6.67□□□□□ -1.34
USP46-208ENST00000512656 KLHL7Q8IXQ5 586 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.67□□□□□ -1.34
USP46-208ENST00000512656 SNX31Q8N9S9 440 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 BBOF1Q8ND07 529 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 MORN4Q8NDC4 146 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 PSD4Q8NDX1 1056 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 FBXO36Q8NEA4 188 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 OR5L2Q8NGL0 311 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 OR14A16Q8NHC5 309 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 LILRB4Q8NHJ6 448 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 GATAD2BQ8WXI9 593 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 RND1Q92730 232 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 CDKL2Q92772 493 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 UBE2E3Q969T4 207 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 NCLNQ969V3 563 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 MS4A6EQ96DS6 147 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 PTCD3Q96EY7 689 aaKnown RBP6.67□□□□□ -1.34
USP46-208ENST00000512656 QRFPRQ96P65 431 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 KCNC2Q96PR1 638 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 ENKD1Q9H0I2 346 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 MCCC2Q9HCC0 563 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 KCNJ16Q9NPI9 418 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 MOCS1Q9NZB8 636 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 WWOXQ9NZC7 414 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 KCMF1Q9P0J7 381 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 COPS7AQ9UBW8 275 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 ITGB1BP2Q9UKP3 347 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 IKZF3Q9UKT9 509 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 PSAT1Q9Y617 370 aa6.67□□□□□ -1.34
USP46-208ENST00000512656 CSMD2Q7Z408 3487 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 A0A0G2JN53 185 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 CTAGE15A4D2H0 777 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 NCF1BA6NI72 391 aaPredicted RBP6.66□□□□□ -1.34
USP46-208ENST00000512656 NCF1CA8MVU1 366 aaPredicted RBP6.66□□□□□ -1.34
USP46-208ENST00000512656 EFCAB8A8MWE9 144 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 C4orf51C9J302 202 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 E7ESA3 106 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 STK16O75716 305 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 OR2J2O76002 312 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 COX7A2P14406 83 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 NCF1P14598 390 aaPredicted RBP6.66□□□□□ -1.34
USP46-208ENST00000512656 TNNI3P19429 210 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 POU3F2P20265 443 aaPredicted RBP6.66□□□□□ -1.34
USP46-208ENST00000512656 SERPINB1P30740 379 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 HNRNPH1P31943 449 aaKnown RBP6.66□□□□□ -1.34
USP46-208ENST00000512656 RFC3P40938 356 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 GDF5P43026 501 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 PAFAH1B1P43034 410 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 GPR143P51810 404 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 LIM2P55344 173 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 GPR85P60893 370 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 TBL3Q12788 808 aaKnown RBP6.66□□□□□ -1.34
USP46-208ENST00000512656 CALCOCO2Q13137 446 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 BIKQ13323 160 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 PDK4Q16654 411 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 ADPRMQ3LIE5 342 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 XKR6Q5GH73 641 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 NDUFAF5Q5TEU4 345 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 SULT1C3Q6IMI6 304 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 ABHD17CQ6PCB6 329 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 OPN5Q6U736 354 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 IL20RBQ6UXL0 311 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 RTL4Q6ZR62 310 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 GK5Q6ZS86 529 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 CEP128Q6ZU80 1094 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 MDGA2Q7Z553 956 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 FGD2Q7Z6J4 655 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 CTAGE6Q86UF2 777 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 TSPYL5Q86VY4 417 aaPredicted RBP6.66□□□□□ -1.34
USP46-208ENST00000512656 CREG2Q8IUH2 290 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 ZBED8Q8IZ13 594 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 FAM47BQ8NA70 645 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 ACBD4Q8NC06 268 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 OR8K3Q8NH51 312 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 PYROXD1Q8WU10 500 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 RNF141Q8WVD5 230 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms