RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 PPP1R36Q96LQ0 422 aa8.89□□□□□ -0.99
SNF8-211ENST00000512243 PPP3R2Q96LZ3 170 aa8.89□□□□□ -0.99
SNF8-211ENST00000512243 SORBS1Q9BX66 1292 aaKnown RBP8.89□□□□□ -0.99
SNF8-211ENST00000512243 NPLQ9BXD5 320 aaPredicted RBP8.89□□□□□ -0.99
SNF8-211ENST00000512243 MRPL1Q9BYD6 325 aaKnown RBP8.89□□□□□ -0.99
SNF8-211ENST00000512243 NUF2Q9BZD4 464 aa8.89□□□□□ -0.99
SNF8-211ENST00000512243 TUBB1Q9H4B7 451 aa8.89□□□□□ -0.99
SNF8-211ENST00000512243 LRTM1Q9HBL6 345 aa8.89□□□□□ -0.99
SNF8-211ENST00000512243 LHX9Q9NQ69 397 aa8.89□□□□□ -0.99
SNF8-211ENST00000512243 LYARQ9NX58 379 aaKnown RBP8.89□□□□□ -0.99
SNF8-211ENST00000512243 HCN3Q9P1Z3 774 aa8.89□□□□□ -0.99
SNF8-211ENST00000512243 ADAM29Q9UKF5 820 aa8.89□□□□□ -0.99
SNF8-211ENST00000512243 PADI1Q9ULC6 663 aa8.89□□□□□ -0.99
SNF8-211ENST00000512243 SPACA6W5XKT8 324 aa8.89□□□□□ -0.99
SNF8-211ENST00000512243 ANKRD11Q6UB99 2663 aaPredicted RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 URB1O60287 2271 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 PSMD12O00232 456 aaPredicted RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 LSM1O15116 133 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 PCDH7O60245 1069 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 EDF1O60869 148 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 VPS4BO75351 444 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 MYO1DO94832 1006 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 KLK1P06870 262 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 TROVE2P10155 538 aaKnown RBP eCLIP8.88□□□□□ -0.99
SNF8-211ENST00000512243 IMPDH2P12268 514 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 RNH1P13489 461 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 ITGAXP20702 1163 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 HIST1H1TP22492 207 aaPredicted RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 PRPH2P23942 346 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 TIA1P31483 386 aaKnown RBP eCLIP8.88□□□□□ -0.99
SNF8-211ENST00000512243 BSGP35613 385 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 STAT5AP42229 794 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 KIR2DL2P43627 348 aaPredicted RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 RPL38P63173 70 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 OLR1P78380 273 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 OCA2Q04671 838 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 TBL3Q12788 808 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 GALNTL6Q49A17 601 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 COX15Q7KZN9 410 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 TIPARPQ7Z3E1 657 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 ZCCHC7Q8N3Z6 543 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 AMER3Q8N944 861 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 ACOT4Q8N9L9 421 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 OR2T11Q8NH01 316 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 CT55Q8WUE5 264 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 CHTF18Q8WVB6 975 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 FGF11Q92914 225 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 KIAA1143Q96AT1 154 aaPredicted RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 TUBGCP3Q96CW5 907 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 APIPQ96GX9 242 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 METTL2AQ96IZ6 378 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 CDADC1Q9BWV3 514 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 EBPLQ9BY08 206 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 ZNF717Q9BY31 904 aaPredicted RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 SPRY4Q9C004 299 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 CHST8Q9H2A9 424 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 DDX31Q9H8H2 851 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 MEAF6Q9HAF1 191 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 CLK4Q9HAZ1 481 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 LYRM4Q9HD34 91 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 MKKSQ9NPJ1 570 aaPredicted RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 C14orf105Q9NVL8 296 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 C1orf109Q9NX04 203 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 TRPC4Q9UBN4 977 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 DKK4Q9UBT3 224 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 PHF11Q9UIL8 331 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 MCM8Q9UJA3 840 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 CROTQ9UKG9 612 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 PADI2Q9Y2J8 665 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 GPR55Q9Y2T6 319 aaPredicted RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 TMED5Q9Y3A6 229 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 USH1CQ9Y6N9 552 aa8.88□□□□□ -0.99
SNF8-211ENST00000512243 TPRP12270 2363 aaKnown RBP8.88□□□□□ -0.99
SNF8-211ENST00000512243 A0A0A6YYD5 115 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 GNG14A0A1W2PPG7 69 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 C21orf140B9A014 251 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 NPIPB8E9PQR5 432 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 SDHDO14521 159 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 SHOXO15266 292 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 CHST10O43529 356 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 SEC22BO75396 215 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 EEDO75530 441 aaKnown RBP8.87□□□□□ -0.99
SNF8-211ENST00000512243 TGDSO95455 350 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 ONECUT2O95948 504 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 JUNP05412 331 aaKnown RBP8.87□□□□□ -0.99
SNF8-211ENST00000512243 CD63P08962 238 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 RAB40ALP0C0E4 278 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 XCR1P46094 333 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 MAPK12P53778 367 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 GYS2P54840 703 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 RAB38P57729 211 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 GNGT1P63211 74 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 MAT1AQ00266 395 aaKnown RBP8.87□□□□□ -0.99
SNF8-211ENST00000512243 MAD2L1Q13257 205 aaPredicted RBP8.87□□□□□ -0.99
SNF8-211ENST00000512243 SLAMF1Q13291 335 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 DNASE1L3Q13609 305 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 KIR3DS1Q14943 382 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 NCF4Q15080 339 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 SYT16Q17RD7 645 aa8.87□□□□□ -0.99
SNF8-211ENST00000512243 FBLN7Q53RD9 439 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms