RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 CCL27Q9Y4X3 112 aa6.68□□□□□ -1.34
PDLIM5-215ENST00000511586 PCDHA9Q9Y5H5 950 aa6.68□□□□□ -1.34
PDLIM5-215ENST00000511586 DNAJC15Q9Y5T4 150 aa6.68□□□□□ -1.34
PDLIM5-215ENST00000511586 IGSF10Q6WRI0 2623 aa6.68□□□□□ -1.34
PDLIM5-215ENST00000511586 NUP210LQ5VU65 1888 aa6.68□□□□□ -1.34
PDLIM5-215ENST00000511586 TRBV11-1A0A0K0K1C0 115 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 C17orf105B2RV13 164 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 TMEM114B3SHH9 223 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 NPIPB8E9PQR5 432 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 CDK2AP1O14519 115 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 NDUFAB1O14561 156 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 OR10H2O60403 315 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 SEC22BO75396 215 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 ANXA4P09525 319 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 LINC00032P0C843 101 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 SLC35E2P0CK97 266 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 DRD2P14416 443 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 PRPH2P23942 346 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 TIA1P31483 386 aaKnown RBP eCLIP6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 ARRB2P32121 409 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 GALNSP34059 522 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 CD97P48960 835 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 ALDH9A1P49189 494 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 GPR143P51810 404 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 XKP51811 444 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 ABCE1P61221 599 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 RAE1P78406 368 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 ARG2P78540 354 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 STX3Q13277 289 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 HEPACAMQ14CZ8 416 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 KIAA0040Q15053 153 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 TLR1Q15399 786 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 UGT3A2Q3SY77 523 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 PLEKHN1Q494U1 663 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 SLC6A19Q695T7 634 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 FCRLBQ6BAA4 426 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 SLC48A1Q6P1K1 146 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 HSDL2Q6YN16 418 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 Q6ZS92 163 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 RPS19BP1Q86WX3 136 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 CRLF3Q8IUI8 442 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 DDIASQ8IXT1 998 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 ST13P4Q8IZP2 240 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 KIRREL3Q8IZU9 778 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 LGI4Q8N135 537 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 KIF2BQ8N4N8 673 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 AMER2Q8N7J2 671 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 APCDD1LQ8NCL9 501 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 OR1N1Q8NGS0 311 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 OR14A16Q8NHC5 309 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 AGR3Q8TD06 166 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 SLC2A12Q8TD20 617 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 C16orf78Q8WTQ4 265 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 TWIST2Q8WVJ9 160 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 NCLNQ969V3 563 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 PNPLA2Q96AD5 504 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 PPWD1Q96BP3 646 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 SENP5Q96HI0 755 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 ART5Q96L15 291 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 CCT7Q99832 543 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 EBPLQ9BY08 206 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 DEFB126Q9BYW3 111 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 FAM107BQ9H098 131 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 RNF32Q9H0A6 362 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 ILKAPQ9H0C8 392 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 EPN3Q9H201 632 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 TUBB1Q9H4B7 451 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 CDCP1Q9H5V8 836 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 LRTM1Q9HBL6 345 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 SLAMF7Q9NQ25 335 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 PFDN4Q9NQP4 134 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 C1orf109Q9NX04 203 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 PLA2G3Q9NZ20 509 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 ZDHHC2Q9UIJ5 367 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 DLGAP4Q9Y2H0 992 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 PTGDR2Q9Y5Y4 395 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 ZNF780BQ9Y6R6 833 aa6.67□□□□□ -1.34
PDLIM5-215ENST00000511586 PIEZO2Q9H5I5 2752 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 ATRXP46100 2492 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 TRAV17A0A0B4J275 112 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 OR5H15A6NDH6 313 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 TTLL8A6PVC2 850 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 TMEM233B4DJY2 109 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 FCHO1O14526 889 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 PIP5K1BO14986 540 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 LSM1O15116 133 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 ITM2AO43736 263 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 SLC28A2O43868 658 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 ERAL1O75616 437 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 ZFAND5O76080 213 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 DDAH2O95865 285 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 WDPCPO95876 746 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 IL3P08700 152 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 PORP16435 677 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 CSNK2A2P19784 350 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 BGNP21810 368 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 SLC1A6P48664 564 aa6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 WDR4P57081 412 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-215ENST00000511586 MLF1P58340 268 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms