RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 HINT3Q9NQE9 182 aaKnown RBP5.79□□□□□ -1.48
USP53-206ENST00000510737 AGPAT3Q9NRZ7 376 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 FAM96BQ9Y3D0 163 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 OR1A2Q9Y585 309 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 DGKBQ9Y6T7 804 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 POLEQ07864 2286 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 A0A1B0GUH1 482 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 SMIM1B2RUZ4 78 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 TEX22C9J3V5 150 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 E2F3O00716 465 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 KCNN4O15554 427 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 TM7SF2O76062 418 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 IGHV4-39P01824 125 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 RPN1P04843 607 aaKnown RBP5.78□□□□□ -1.48
USP53-206ENST00000510737 TRIM49P0CI25 452 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 TRIM49CP0CI26 452 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 MAN1A1P33908 653 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 DAOAP59103 153 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 NUCB2P80303 420 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 TLE4Q04727 773 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 IRF4Q15306 451 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 KLHL40Q2TBA0 621 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 WSCD2Q2TBF2 565 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 TMEM198Q66K66 360 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 FAM53AQ6NSI3 398 aaPredicted RBP5.78□□□□□ -1.48
USP53-206ENST00000510737 DUS1LQ6P1R4 473 aaKnown RBP5.78□□□□□ -1.48
USP53-206ENST00000510737 NRROSQ86YC3 692 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 HPS6Q86YV9 775 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 PCDH20Q8N6Y1 951 aaKnown RBP5.78□□□□□ -1.48
USP53-206ENST00000510737 XXYLT1Q8NBI6 393 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 SLC4A11Q8NBS3 891 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 TAF4BQ92750 862 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 PPP1R16AQ96I34 528 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 CCDC114Q96M63 670 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 ULBP3Q9BZM4 244 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 CXXC4Q9H2H0 198 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 NDST4Q9H3R1 872 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 CYP3A43Q9HB55 503 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 MCCC2Q9HCC0 563 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 C20orf141Q9NUB4 165 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 PANK4Q9NVE7 773 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 VPS28Q9UK41 221 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 COL6A5A8TX70 2615 aa5.78□□□□□ -1.48
USP53-206ENST00000510737 CSPG4Q6UVK1 2322 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 TRPM6Q9BX84 2022 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 NR5A2O00482 541 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 XPO1O14980 1071 aaKnown RBP5.77□□□□□ -1.49
USP53-206ENST00000510737 EIF3DO15371 548 aaKnown RBP eCLIP5.77□□□□□ -1.49
USP53-206ENST00000510737 ZW10O43264 779 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 PCDH7O60245 1069 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 REC8O95072 547 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 TFP02787 698 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 DDX5P17844 614 aaKnown RBP5.77□□□□□ -1.49
USP53-206ENST00000510737 TRIM21P19474 475 aaKnown RBP5.77□□□□□ -1.49
USP53-206ENST00000510737 POU1F1P28069 291 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 NDST2P52849 883 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 AP3M2P53677 418 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 IST1P53990 364 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 LMO4P61968 165 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 RPS18P62269 152 aaKnown RBP5.77□□□□□ -1.49
USP53-206ENST00000510737 RUNX1T1Q06455 604 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 FOXD4Q12950 439 aaPredicted RBP5.77□□□□□ -1.49
USP53-206ENST00000510737 RAPSNQ13702 412 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 ZNF235Q14590 738 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 RNPS1Q15287 305 aaKnown RBP5.77□□□□□ -1.49
USP53-206ENST00000510737 LRRC73Q5JTD7 316 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 DCAF10Q5QP82 559 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 SYPL2Q5VXT5 272 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 FAM199XQ6PEV8 388 aaPredicted RBP5.77□□□□□ -1.49
USP53-206ENST00000510737 QSOX2Q6ZRP7 698 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 SCML4Q8N228 414 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 OR52I2Q8NH67 350 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 UBA3Q8TBC4 463 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 DQX1Q8TE96 717 aaKnown RBP5.77□□□□□ -1.49
USP53-206ENST00000510737 CT55Q8WUE5 264 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 FCAMRQ8WWV6 532 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 TMEM190Q8WZ59 177 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 RAB7BQ96AH8 199 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 ARSGQ96EG1 525 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 GRAMD2BQ96HH9 432 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 EPSTI1Q96J88 318 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 LRR1Q96L50 414 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 ATOH8Q96SQ7 321 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 SH3GL2Q99962 352 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 ACTL8Q9H568 366 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 TFB2MQ9H5Q4 396 aaKnown RBP5.77□□□□□ -1.49
USP53-206ENST00000510737 FGF22Q9HCT0 170 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 SLC52A3Q9NQ40 469 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 TMEM160Q9NX00 188 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 TTC7AQ9ULT0 858 aaPredicted RBP5.77□□□□□ -1.49
USP53-206ENST00000510737 PRRC2AP48634 2157 aaKnown RBP5.77□□□□□ -1.49
USP53-206ENST00000510737 ACANP16112 2415 aa5.77□□□□□ -1.49
USP53-206ENST00000510737 NSD1Q96L73 2696 aaPredicted RBP5.76□□□□□ -1.49
USP53-206ENST00000510737 F5H5T6 163 aa5.76□□□□□ -1.49
USP53-206ENST00000510737 EPB41L2O43491 1005 aaKnown RBP5.76□□□□□ -1.49
USP53-206ENST00000510737 PRKNO60260 465 aaPredicted RBP5.76□□□□□ -1.49
USP53-206ENST00000510737 KIAA0754O94854 1291 aa5.76□□□□□ -1.49
USP53-206ENST00000510737 HLA-DRAP01903 254 aa5.76□□□□□ -1.49
USP53-206ENST00000510737 ERVK-10P10266 1014 aa5.76□□□□□ -1.49
USP53-206ENST00000510737 CASP14P31944 242 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms