RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	TLR1	Q15399	786 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	MINDY4	Q4G0A6	757 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	VPS26B	Q4G0F5	336 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	TIGD2	Q4W5G0	525 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	COQ5	Q5HYK3	327 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	LAPTM4B	Q86VI4	370 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	SNX32	Q86XE0	403 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	DTX1	Q86Y01	620 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	OR4N5	Q8IXE1	308 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	CT55	Q8WUE5	264 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	VPS33A	Q96AX1	596 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	PTCHD1	Q96NR3	888 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	BBS4	Q96RK4	519 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	VN1R1	Q9GZP7	353 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	RMND5A	Q9H871	391 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	NECTIN3	Q9NQS3	549 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	ARL8B	Q9NVJ2	186 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	BTNL2	Q9UIR0	455 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	LEF1	Q9UJU2	399 aa	Predicted RBP	11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	MKL2	Q9ULH7	1088 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	PADI2	Q9Y2J8	665 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	NDUFAF1	Q9Y375	327 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	MSRB2	Q9Y3D2	182 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	CLDN16	Q9Y5I7	305 aa		11.23	□□□□□ -0.61
RACK1-223	ENST00000510199	IGKV3D-11	A0A0A0MRZ8	115 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199		A0A1W2PRB8	838 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	OR2W5	A6NFC9	320 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	IDS	B3KWA1	339 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	C21orf140	B9A014	251 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	EBAG9	O00559	213 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	ANGPT2	O15123	496 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	KLF7	O75840	302 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	HEXB	P07686	556 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	SLC35E2	P0CK97	266 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	C8orf89	P0DMQ9	161 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	LIPC	P11150	499 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	CPM	P14384	443 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	MAOA	P21397	527 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	MPI	P34949	423 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	FEN1	P39748	380 aa	Known RBP	11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	EMP2	P54851	167 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	RPS15	P62841	145 aa	Known RBP	11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	ID2	Q02363	134 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	DNASE1L3	Q13609	305 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	MAPKAPK3	Q16644	382 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	MMEL1	Q495T6	779 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	CPZ	Q66K79	652 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	FAM180B	Q6P0A1	224 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	PRSS58	Q8IYP2	241 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	CCDC116	Q8IYX3	515 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	LRRC25	Q8N386	305 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	POU5F2	Q8N7G0	328 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	ENDOV	Q8N8Q3	282 aa	Known RBP	11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	OR2Y1	Q8NGV0	311 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	ZFP28	Q8NHY6	868 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	OR5P2	Q8WZ92	322 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	NKD1	Q969G9	470 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	NSL1	Q96IY1	281 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	PELO	Q9BRX2	385 aa	Known RBP	11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	TUBB6	Q9BUF5	446 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	GPR87	Q9BY21	358 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	ALOXE3	Q9BYJ1	711 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	SOX17	Q9H6I2	414 aa	Predicted RBP	11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	SLAMF7	Q9NQ25	335 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	TAGLN3	Q9UI15	199 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	CROT	Q9UKG9	612 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	FARSA	Q9Y285	508 aa	Known RBP	11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	MAN2B2	Q9Y2E5	1009 aa		11.22	□□□□□ -0.61
RACK1-223	ENST00000510199	DOCK10	Q96BY6	2186 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199		A0A1W2PS29	197 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	TCRBV16S1A1N1	A0A5B0	115 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	ASPDH	A6ND91	283 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	TGFBR3L	H3BV60	316 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	FBP2	O00757	339 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	TERT	O14746	1132 aa	Known RBP	11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	PCDH17	O14917	1159 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	ALOX12B	O75342	701 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	UBOX5	O94941	541 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	ATP1B1	P05026	303 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	ESRRA	P11474	423 aa	Predicted RBP	11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	SPINK2	P20155	84 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	GALNS	P34059	522 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	DLST	P36957	453 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	FOLR3	P41439	243 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	STT3A	P46977	705 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	NCBP2	P52298	156 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	EFNA3	P52797	238 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	MANF	P55145	182 aa	Known RBP	11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	DUSP2	Q05923	314 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	NSDHL	Q15738	373 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	ZNF750	Q32MQ0	723 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	TBC1D25	Q3MII6	688 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	PAGE3	Q5JUK9	113 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	REP15	Q6BDI9	236 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	SLC2A7	Q6PXP3	512 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	SHISA6	Q6ZSJ9	500 aa		11.21	□□□□□ -0.61
RACK1-223	ENST00000510199	ANKRD46	Q86W74	232 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms