RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 IGSF5Q9NSI5 407 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 CD274Q9NZQ7 290 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 RPH3AQ9Y2J0 694 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-202ENST00000509637 A0A088AWK7 358 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 PLPP1O14494 284 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 TMPRSS11DO60235 418 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 HCN1O60741 890 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 EEDO75530 441 aaKnown RBP14.62□□□□□ -0.07
RAB40C-202ENST00000509637 FBXO45P0C2W1 286 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 ZNF10P21506 573 aaPredicted RBP14.62□□□□□ -0.07
RAB40C-202ENST00000509637 CEACAM8P31997 349 aaPredicted RBP14.62□□□□□ -0.07
RAB40C-202ENST00000509637 PCDH1Q08174 1060 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 CDKL4Q5MAI5 379 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 WLSQ5T9L3 541 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 DESI1Q6ICB0 168 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 MRM1Q6IN84 353 aaKnown RBP14.62□□□□□ -0.07
RAB40C-202ENST00000509637 CMC1Q7Z7K0 106 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 CDC20BQ86Y33 519 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 ZBED8Q8IZ13 594 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 MMP21Q8N119 569 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 OR5L2Q8NGL0 311 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 NEIL3Q8TAT5 605 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 RBBP8Q99708 897 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 ZFP64Q9NPA5 681 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 ACKR4Q9NPB9 350 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 ASB4Q9Y574 426 aa14.62□□□□□ -0.07
RAB40C-202ENST00000509637 MAP1AP78559 2803 aaPredicted RBP14.61□□□□□ -0.07
RAB40C-202ENST00000509637 A0A1W2PPR1 153 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 A0A1W2PR48 441 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 GLOD5A6NK44 160 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 FAM159BA6NKW6 160 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 UBXN8O00124 270 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 TRIM3O75382 744 aaPredicted RBP14.61□□□□□ -0.07
RAB40C-202ENST00000509637 PCNAP12004 261 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 SOX18P35713 384 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 SLC37A1P57057 533 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 HERVK_113P63132 956 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 ERVK-8P63133 956 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 CRYZQ08257 329 aaKnown RBP14.61□□□□□ -0.07
RAB40C-202ENST00000509637 SLC25A35Q3KQZ1 300 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 DCST1Q5T197 706 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 KHDRBS2Q5VWX1 349 aaKnown RBP14.61□□□□□ -0.07
RAB40C-202ENST00000509637 OR4C11Q6IEV9 310 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 SYDE1Q6ZW31 735 aaPredicted RBP14.61□□□□□ -0.07
RAB40C-202ENST00000509637 TCAIMQ8N3R3 496 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 FBXW8Q8N3Y1 598 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 ZNF441Q8N8Z8 693 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 SARAFQ96BY9 339 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 FBXL20Q96IG2 436 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 ERVK-6Q9BXR3 956 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 ALG9Q9H6U8 611 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 RPF2Q9H7B2 306 aaKnown RBP14.61□□□□□ -0.07
RAB40C-202ENST00000509637 CBLCQ9ULV8 474 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 ERVK-19Q9WJR5 959 aa14.61□□□□□ -0.07
RAB40C-202ENST00000509637 TCRBV9S1A1TA0A576 114 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 EFCAB8A8MWE9 144 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 ACSL3O95573 720 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 CT62P0C5K7 136 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 SLC35E2BP0CK96 405 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 SSTR4P31391 388 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 BSGP35613 385 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 SSR2P43308 183 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 KIR2DL3P43628 341 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 AGFG1P52594 562 aaKnown RBP14.6□□□□□ -0.07
RAB40C-202ENST00000509637 ZNF136P52737 540 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 ADAM8P78325 824 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 DUSP8Q13202 625 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 ZNF267Q14586 743 aaPredicted RBP14.6□□□□□ -0.07
RAB40C-202ENST00000509637 EBPQ15125 230 aaKnown RBP14.6□□□□□ -0.07
RAB40C-202ENST00000509637 TRADDQ15628 312 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 AP5B1Q2VPB7 878 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 MED27Q6P2C8 311 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 KRTAP1-3Q8IUG1 177 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 HUS1BQ8NHY5 278 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 DGAT2Q96PD7 388 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 TIMP4Q99727 224 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 SMR3AQ99954 134 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 WWTR1Q9GZV5 400 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 DMRT3Q9NQL9 472 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 SLC6A5Q9Y345 797 aa14.6□□□□□ -0.07
RAB40C-202ENST00000509637 ANKHD1Q8IWZ3 2542 aaKnown RBP14.6□□□□□ -0.07
RAB40C-202ENST00000509637 DOCK7Q96N67 2140 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 A0A0A6YYD5 115 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 A6NNC1 897 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 PGRMC2O15173 223 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 EPPINO95925 133 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 ALOX15P16050 662 aaPredicted RBP14.59□□□□□ -0.07
RAB40C-202ENST00000509637 TCP1P17987 556 aaKnown RBP14.59□□□□□ -0.07
RAB40C-202ENST00000509637 UQCRC1P31930 480 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 FBXW4P57775 412 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 ATP6V0D1P61421 351 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 RPS13P62277 151 aaKnown RBP14.59□□□□□ -0.07
RAB40C-202ENST00000509637 TNFRSF17Q02223 184 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 LAPTM5Q13571 262 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 DDX39BQ13838 428 aaKnown RBP14.59□□□□□ -0.07
RAB40C-202ENST00000509637 RCN2Q14257 317 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 NTRK2Q16620 822 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 ACSF3Q4G176 576 aaPredicted RBP14.59□□□□□ -0.07
RAB40C-202ENST00000509637 TMEM35AQ53FP2 167 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 PLXDC2Q6UX71 529 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms