RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 OR4F6Q8NGB9 312 aa10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 ACOT11Q8WXI4 607 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 TMEM203Q969S6 136 aa10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 MALSU1Q96EH3 234 aa10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 SCRN2Q96FV2 425 aa10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 ZNF514Q96K75 400 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 OSBPL2Q9H1P3 480 aa10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 SLC52A2Q9HAB3 445 aa10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 NLE1Q9NVX2 485 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 SERGEFQ9UGK8 458 aa10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 ADAM28Q9UKQ2 775 aa10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 CMAHPQ9Y471 501 aa10.33□□□□□ -0.76
PDLIM5-210ENST00000508216 CHST10O43529 356 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 ZNF821O75541 412 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 IFNA17P01571 189 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 SNRPB2P08579 225 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 SULT1A3P0DMM9 295 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 SULT1A4P0DMN0 295 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 NCF1P14598 390 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 EEFSECP57772 596 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 RPS7P62081 194 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 IFRD2Q12894 506 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 TSPAN31Q12999 210 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 MBTPS1Q14703 1052 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 GRIN2CQ14957 1233 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 DENND1BQ6P3S1 775 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 FBXO46Q6PJ61 603 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 PTCHD4Q6ZW05 846 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 PIWIL4Q7Z3Z4 852 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 GALNTL5Q7Z4T8 443 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 FGD2Q7Z6J4 655 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 PROSER1Q86XN7 944 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 ANGPTL5Q86XS5 388 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 GPR65Q8IYL9 337 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 OR11H7Q8NGC8 314 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 FAM110BQ8TC76 370 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 PCNPQ8WW12 178 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 LCN9Q8WX39 176 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 PIGKQ92643 395 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 GCDHQ92947 438 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 PYCR2Q96C36 320 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 MARS2Q96GW9 593 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 RNF157Q96PX1 679 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 SOSTQ9BQB4 213 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 PCGF1Q9BSM1 259 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 TMEM208Q9BTX3 173 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 MRPL4Q9BYD3 311 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 IKZF4Q9H2S9 585 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 PARPBPQ9NWS1 579 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 PAK5Q9P286 719 aa10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 ZNF490Q9ULM2 529 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-210ENST00000508216 TBC1D3FA6NER0 549 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 COLCA2A8K830 154 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 DISC1C4P0D8 188 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 PGRMC2O15173 223 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 ICOSLGO75144 302 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 C6orf47O95873 294 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 F2P00734 622 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 F12P00748 615 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 SERPINA3P01011 423 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 TYRP14679 529 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 ZNF44P15621 663 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 RHCEP18577 417 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 ATF3P18847 181 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 ELK3P41970 407 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 MATKP42679 507 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 PRKXP51817 358 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 NAPAP54920 295 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 TAS2R40P59535 323 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 CXADRP78310 365 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 ELP6Q0PNE2 266 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 UBXN2BQ14CS0 331 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 LRRC38Q5VT99 294 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 FBXW9Q5XUX1 488 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 ZNF470Q6ECI4 717 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 ABLIM2Q6H8Q1 611 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 ALKAL1Q6UXT8 129 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 NUDT13Q86X67 352 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 NEK7Q8TDX7 302 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 LRRN4Q8WUT4 740 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 AP3S1Q92572 193 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 KCNJ9Q92806 393 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 WNT8BQ93098 351 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 MR1Q95460 341 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 KCNC2Q96PR1 638 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 PNMA5Q96PV4 448 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 TSNAXQ99598 290 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 IL22Q9GZX6 179 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 HDHD2Q9H0R4 259 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 PIGMQ9H3S5 423 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 EPHX3Q9H6B9 360 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 JPH1Q9HDC5 661 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 DLL4Q9NR61 685 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 LATS2Q9NRM7 1088 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 C1orf112Q9NSG2 853 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 STARD10Q9Y365 291 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 RGPD2P0DJD1 1756 aa10.31□□□□□ -0.76
PDLIM5-210ENST00000508216 SRCAPQ6ZRS2 3230 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms