RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZNF747Q9BV97 191 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 BHLHE41Q9C0J9 482 aaPredicted RBP6.51□□□□□ -1.37
VCAN-207ENST00000507162 UBQLN3Q9H347 655 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 KLHL31Q9H511 634 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 CLK4Q9HAZ1 481 aaKnown RBP6.51□□□□□ -1.37
VCAN-207ENST00000507162 CCDC177Q9NQR7 707 aaPredicted RBP6.51□□□□□ -1.37
VCAN-207ENST00000507162 CLCF1Q9UBD9 225 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 COPS7AQ9UBW8 275 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 LIMA1Q9UHB6 759 aaKnown RBP6.51□□□□□ -1.37
VCAN-207ENST00000507162 TMEFF2Q9UIK5 374 aaPredicted RBP6.51□□□□□ -1.37
VCAN-207ENST00000507162 PROCRQ9UNN8 238 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 DTX4Q9Y2E6 619 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 C15orf41Q9Y2V0 281 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 EPN1Q9Y6I3 576 aaPredicted RBP6.51□□□□□ -1.37
VCAN-207ENST00000507162 CMYA5Q8N3K9 4069 aa6.51□□□□□ -1.37
VCAN-207ENST00000507162 A0A0G2JN53 185 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 URADA6NGE7 173 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 ESPNB1AK53 854 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 TRIM77I1YAP6 450 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 ZBTB14O43829 449 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 SNX4O95219 450 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 SERPINC1P01008 464 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 CGAP01215 116 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 PSMA3P25788 255 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 GMPRP36959 345 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 HNRNPFP52597 415 aaKnown RBP6.5□□□□□ -1.37
VCAN-207ENST00000507162 IRX1P78414 480 aaPredicted RBP6.5□□□□□ -1.37
VCAN-207ENST00000507162 ID2Q02363 134 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 STX4Q12846 297 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 RPS6KA1Q15418 735 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 ZNF672Q499Z4 452 aaPredicted RBP6.5□□□□□ -1.37
VCAN-207ENST00000507162 IQCCQ4KMZ1 466 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 TOR1AIP1Q5JTV8 583 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 TBCELQ5QJ74 424 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 OR2A2Q6IF42 318 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 ALKBH5Q6P6C2 394 aaKnown RBP6.5□□□□□ -1.37
VCAN-207ENST00000507162 SEZ6L2Q6UXD5 910 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 TMEM64Q6YI46 380 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 REXO1L1PQ8IX06 675 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 TBC1D19Q8N5T2 526 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 SLC15A4Q8N697 577 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 OTUD6BQ8N6M0 293 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 SEMA6DQ8NFY4 1073 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 OR14L1PQ8NHC6 308 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 C10orf105Q8TEF2 133 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 DOK4Q8TEW6 326 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 FAM216AQ8WUB2 273 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 TP53INP1Q96A56 240 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 C11orf24Q96F05 449 aaPredicted RBP6.5□□□□□ -1.37
VCAN-207ENST00000507162 FAR2Q96K12 515 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 BTBD9Q96Q07 612 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 GAL3ST4Q96RP7 486 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 G6PC3Q9BUM1 346 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 HEMGNQ9BXL5 484 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 CACNG6Q9BXT2 260 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 P2RY12Q9H244 342 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 CATSPERZQ9NTU4 200 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 DDX56Q9NY93 547 aaKnown RBP6.5□□□□□ -1.37
VCAN-207ENST00000507162 CISD1Q9NZ45 108 aaKnown RBP6.5□□□□□ -1.37
VCAN-207ENST00000507162 MARCH4Q9P2E8 410 aaPredicted RBP6.5□□□□□ -1.37
VCAN-207ENST00000507162 UVRAGQ9P2Y5 699 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 GALPQ9UBC7 116 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 HEY2Q9UBP5 337 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 HYOU1Q9Y4L1 999 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 CLDN16Q9Y5I7 305 aa6.5□□□□□ -1.37
VCAN-207ENST00000507162 A0A087X0T9 212 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 ANKRD33BA6NCL7 494 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 SLC22A20A6NK97 555 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 TP53I11O14683 189 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 CD3EAPO15446 510 aaKnown RBP6.49□□□□□ -1.37
VCAN-207ENST00000507162 NIPSNAP2O75323 286 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 ETHE1O95571 254 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 GAS8O95995 478 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 FBXO45P0C2W1 286 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 FAM228BP0C875 321 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 VSIG8P0DPA2 414 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 IMPA1P29218 277 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 TTPAP49638 278 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 FBXW4P57775 412 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 TBPL1P62380 186 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 LGALS3BPQ08380 585 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 NAE1Q13564 534 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 FBLN7Q53RD9 439 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 AARS2Q5JTZ9 985 aaKnown RBP6.49□□□□□ -1.37
VCAN-207ENST00000507162 CTSL3PQ5NE16 218 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 TSTD2Q5T7W7 516 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 FNDC7Q5VTL7 733 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 DARS2Q6PI48 645 aaKnown RBP6.49□□□□□ -1.37
VCAN-207ENST00000507162 STAC2Q6ZMT1 411 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 KBTBD8Q8NFY9 601 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 OR52K1Q8NGK4 314 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 OR1J4Q8NGS1 313 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 NT5CQ8TCD5 201 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 ZNF721Q8TF20 911 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 ZNF418Q8TF45 676 aaPredicted RBP6.49□□□□□ -1.37
VCAN-207ENST00000507162 SENP5Q96HI0 755 aaPredicted RBP6.49□□□□□ -1.37
VCAN-207ENST00000507162 ZNF778Q96MU6 729 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 PPP1R2P1Q96PQ5 205 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 PKP2Q99959 881 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 PRR14Q9BWN1 585 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms