RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 K7EPI3 171 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 EEF2KO00418 725 aaKnown RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 CHEK1O14757 476 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 OGTO15294 1046 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 BUB3O43684 328 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 FGF17O60258 216 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 NME2P1O60361 137 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 SMPD2O60906 423 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 SAP30O75446 220 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR6A2O95222 327 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 NTN1O95631 604 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 CPNE6O95741 557 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 NGFP01138 241 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 GPIP06744 558 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 F7P08709 466 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC2A2P11168 524 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 ODC1P11926 461 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 B4GALT1P15291 398 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 CTNNA2P26232 953 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 MARK3P27448 753 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 CHRNA3P32297 505 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 MAGEA11P43364 429 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 PITPNBP48739 271 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 DCDC1P59894 354 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 SP3Q02447 781 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 GRB14Q14449 540 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 KARSQ15046 597 aaKnown RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 TAF7Q15545 349 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 CCDC6Q16204 474 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF74Q16587 644 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 DUSP5Q16690 384 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 DEFB115Q30KQ5 88 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 KIAA1644Q3SXP7 199 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 LRRC37A5PQ49AS3 106 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 EPC2Q52LR7 807 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 FASTKD1Q53R41 847 aaKnown RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF776Q68DI1 518 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 RAET1GQ6H3X3 334 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZCCHC12Q6PEW1 402 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 UNC5DQ6UXZ4 953 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 RBMS3Q6XE24 437 aaKnown RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 C17orf107Q6ZR85 190 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZDHHC17Q8IUH5 632 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZC3H3Q8IXZ2 948 aaKnown RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 CNPY4Q8N129 248 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 RFLNBQ8N5W9 214 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR13C5Q8NGS8 318 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR1L3Q8NH93 324 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 U2AF1L4Q8WU68 220 aaKnown RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 APOBEC4Q8WW27 367 aaKnown RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 DYRK2Q92630 601 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZBTB9Q96C00 473 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 BPIFA2Q96DR5 249 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 GIMAP5Q96F15 307 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 C10orf90Q96M02 699 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 PLEKHF1Q96S99 279 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 COQ7Q99807 217 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 CCM2Q9BSQ5 444 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 GANQ9H2C0 597 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 DPH5Q9H2P9 285 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 DCLRE1BQ9H816 532 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 SIX2Q9NPC8 291 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 NGBQ9NPG2 151 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZFP57Q9NU63 452 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 DBF4Q9UBU7 674 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 POMT2Q9UKY4 750 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 ETV7Q9Y603 341 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 SELENOKQ9Y6D0 94 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 AP1M2Q9Y6Q5 423 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 ARFGEF2Q9Y6D5 1785 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 UMODL1Q5DID0 1318 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 RTL9Q8NET4 1388 aa2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 IBTKQ9P2D0 1353 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC11-205ENST00000506426 SCN5AQ14524 2016 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 KDM3BQ7LBC6 1761 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 VIRMAQ69YN4 1812 aaKnown RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 A0A087WUV0 522 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 TRBV4-1A0A0J9YWV2 114 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 ATP6AP2A0A1C7CYW4 349 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 KRTAP29-1A8MX34 341 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 KPNA7A9QM74 516 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 ERVV-1B6SEH8 477 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 MLNRO43193 412 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SOCS5O75159 536 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 AKR7A3O95154 331 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 PTBP3O95758 552 aaKnown RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 PAK4O96013 591 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 PDGFBP01127 241 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 VTNP04004 478 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 PRSS1P07477 247 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SERPINF2P08697 491 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 EZRP15311 586 aaKnown RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 RPL35AP18077 110 aaKnown RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 AADACP22760 399 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 FCARP24071 287 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 ACKR3P25106 362 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 DNAJB1P25685 340 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 GJB2P29033 226 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms