RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 F2RL3Q96RI0 385 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 TIMP4Q99727 224 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 CCL19Q99731 98 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 BDH2Q9BUT1 245 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 PPANQ9NQ55 473 aaKnown RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 QPCTLQ9NXS2 382 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 C6orf203Q9P0P8 240 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 VTI1BQ9UEU0 232 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 CNOT11Q9UKZ1 510 aaKnown RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 DAPP1Q9UN19 280 aa6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 EIF3LQ9Y262 564 aaKnown RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 CHCHD2Q9Y6H1 151 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-203ENST00000504841 MBD3L4A6NDZ8 208 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 MBD3L3A6NE82 208 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 MBD3L5A6NJ08 208 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 RNF212BA8MTL3 300 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 HRKO00198 91 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 SAP18O00422 153 aaKnown RBP6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 DYRK3O43781 588 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 FGF17O60258 216 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 BANF1O75531 89 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 CLEC3AO75596 197 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 GOSR1O95249 250 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 AHSGP02765 367 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 CCDC175P0C221 793 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 NID1P14543 1247 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF37AP17032 561 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 BMP7P18075 431 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 PGAM1P18669 254 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 GNAZP19086 355 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 CPN2P22792 545 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 SERPINB3P29508 390 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 CXCR5P32302 372 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 HERVK_113P63132 956 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 ERVK-8P63133 956 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 PLIN5Q00G26 463 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 SRYQ05066 204 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 TGM3Q08188 693 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 FOXF2Q12947 444 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 RCAN2Q14206 197 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF460Q14592 562 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 PPP1R3AQ16821 1122 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 MPEG1Q2M385 716 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 EIPR1Q53HC9 387 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 WIPI1Q5MNZ9 446 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 DCST1Q5T197 706 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 DESI1Q6ICB0 168 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 LYPD8Q6UX82 237 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF793Q6ZN11 406 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 SLCO4C1Q6ZQN7 724 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 LIAT1Q6ZQX7 453 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 SLC29A4Q7RTT9 530 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 VN1R5Q7Z5H4 357 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 GCNT2Q8N0V5 402 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 KRT78Q8N1N4 520 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 RNF10Q8N5U6 811 aaKnown RBP6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 SNX31Q8N9S9 440 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 MBD3L2Q8NHZ7 208 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 NUBPLQ8TB37 319 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 MAIP1Q8WWC4 291 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 SMPDL3BQ92485 455 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 PIGTQ969N2 578 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 PPWD1Q96BP3 646 aaKnown RBP6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 SIGLEC10Q96LC7 697 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 DACH2Q96NX9 599 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 MAPKAP1Q9BPZ7 522 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 ERVK-6Q9BXR3 956 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 UGT2B28Q9BY64 529 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 PRDM14Q9GZV8 571 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 PROK2Q9HC23 129 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 SH2D2AQ9NP31 389 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 KLHL28Q9NXS3 571 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 WWOXQ9NZC7 414 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 CNIH4Q9P003 139 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 ERVK-19Q9WJR5 959 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 ZKSCAN5Q9Y2L8 839 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 PCDHGB3Q9Y5G1 929 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 SPACA6W5XKT8 324 aa6.31□□□□□ -1.4
NPIPB3-203ENST00000504841 NIPBLQ6KC79 2804 aaeCLIP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 IQANK1A0A1B0GTG1 560 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 CD8B2A6NJW9 211 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 H0Y3Z8 333 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 GNB5O14775 395 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 PRKRAO75569 313 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 SMNDC1O75940 238 aaKnown RBP eCLIP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 TBX6O95947 436 aaPredicted RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 C1QAP02745 245 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 IGKV3-11P04433 115 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 FREM3P0C091 2139 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 FBXO45P0C2W1 286 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 CYP4B1P13584 511 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 GSTM2P28161 218 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 HPDP32754 393 aaPredicted RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 MAGEA3P43357 314 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 RPL21P46778 160 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 STT3AP46977 705 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 KCNC1P48547 511 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 CDK9P50750 372 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 FBXW4P57775 412 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 TBL3Q12788 808 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms