RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 POLR2J2Q9GZM3 115 aaKnown RBP13.41□□□□□ -0.26
TCOF1-207ENST00000504761 CLMPQ9H6B4 373 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 MKKSQ9NPJ1 570 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-207ENST00000504761 ZSCAN32Q9NX65 697 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 FAM221BA6H8Z2 402 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 SCDO00767 359 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 PSIP1O75475 530 aaKnown RBP13.4□□□□□ -0.26
TCOF1-207ENST00000504761 PCYT1AP49585 367 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 POU6F2P78424 691 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-207ENST00000504761 TMEM52BQ4KMG9 183 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 RSBN1Q5VWQ0 802 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-207ENST00000504761 ADNP2Q6IQ32 1131 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 ALKBH2Q6NS38 261 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 OR2L5Q8NG80 312 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 SNX33Q8WV41 574 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 TMEM203Q969S6 136 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 NLGN3Q9NZ94 848 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 SLC23A2Q9UGH3 650 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 C9J4A7 227 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 KRT33AO76009 404 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 IFI30P13284 250 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 OPRD1P41143 372 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 KIAA1614Q5VZ46 1190 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 ADAMTSL4Q6UY14 1074 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 ADGRG5Q8IZF4 528 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 ZNF354BQ96LW1 612 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 PLA2G2FQ9BZM2 168 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 C6orf106Q9H6K1 298 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-207ENST00000504761 IL1RAPQ9NPH3 570 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 CACNA1CQ13936 2221 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 STX11O75558 287 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 HMGN2P05204 90 aaKnown RBP13.4□□□□□ -0.26
TCOF1-207ENST00000504761 DDCP20711 480 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 NRG3P56975 720 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 MYBPC1Q00872 1141 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 SLC5A12Q1EHB4 618 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 C6orf132Q5T0Z8 1188 aa13.4□□□□□ -0.26
TCOF1-207ENST00000504761 OGFRL1Q5TC84 451 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-207ENST00000504761 SLC5A10A0PJK1 596 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 CDKN2CP42773 168 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 TUBB3Q13509 450 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 DDI2Q5TDH0 399 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 FAM83HQ6ZRV2 1179 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-207ENST00000504761 HCAR2Q8TDS4 363 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 SLITRK2Q9H156 845 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 GPR89AB7ZAQ6 455 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 ARNTLO00327 626 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 GFRA2O00451 464 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 TMCC2O75069 709 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 PRKRAO75569 313 aaKnown RBP13.39□□□□□ -0.27
TCOF1-207ENST00000504761 ARHGEF15O94989 841 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 C1QAP02745 245 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 GPR89BP0CG08 455 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 HIST1H1TP22492 207 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-207ENST00000504761 IL12AP29459 219 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 PPP2CBP62714 309 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 PPP2CAP67775 309 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 B4GALNT1Q00973 533 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 OR52P1PQ8NH57 321 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 OR51A7Q8NH64 312 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 CCL4L1Q8NHW4 92 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 UBE2ZQ9H832 354 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-207ENST00000504761 ANTXRLA6NF34 631 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 TARM1B6A8C7 271 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 MPZL2O60487 215 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 TSPAN12O95859 305 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 NDUFV2P19404 249 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 CLCN2P51788 898 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 ITGA1P56199 1179 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 ERV3-1Q14264 604 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 IHHQ14623 411 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 MLF2Q15773 248 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-207ENST00000504761 PGM2L1Q6PCE3 622 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 UTS2BQ765I0 119 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 LAPTM4BQ86VI4 370 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 L3MBTL4Q8NA19 623 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 MAELQ96JY0 434 aaKnown RBP13.39□□□□□ -0.27
TCOF1-207ENST00000504761 FOXQ1Q9C009 403 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 ABCB9Q9NP78 766 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 FTSJ1Q9UET6 329 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 NEU3Q9UQ49 428 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 AHCTF1Q8WYP5 2266 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 H0YIV9 168 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 BLOC1S5-TXNDC5H3BN57 136 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 RASAL1O95294 804 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 EIF2DP41214 584 aaKnown RBP13.39□□□□□ -0.27
TCOF1-207ENST00000504761 SLC9A3P48764 834 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 RPP38P78345 283 aaKnown RBP13.39□□□□□ -0.27
TCOF1-207ENST00000504761 KIR2DS3Q14952 304 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 CDKN3Q16667 212 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 CNPY1Q3B7I2 92 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 TECPR1Q7Z6L1 1165 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-207ENST00000504761 ZNF433Q8N7K0 673 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-207ENST00000504761 RFKQ969G6 155 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 ALKBH4Q9NXW9 302 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 ADAM30Q9UKF2 790 aa13.39□□□□□ -0.27
TCOF1-207ENST00000504761 SCN10AQ9Y5Y9 1956 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 ZNF99A8MXY4 864 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms