RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 DLGAP4Q9Y2H0 992 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 MMACHCQ9Y4U1 282 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 NUP210LQ5VU65 1888 aa9.42□□□□□ -0.9
NUP54-203ENST00000504173 CCDC88CQ9P219 2028 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 C1orf226A1L170 272 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 CDC14CA4D256 554 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 GLOD5A6NK44 160 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 ALOX12BO75342 701 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 DDAH2O95865 285 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 RECKO95980 971 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 IL3P08700 152 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 RNF224P0DH78 156 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 C8orf89P0DMQ9 161 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 TROVE2P10155 538 aaKnown RBP eCLIP9.41□□□□□ -0.9
NUP54-203ENST00000504173 PRKAR1AP10644 381 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 PRPS2P11908 318 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 BCKDHAP12694 445 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 ACPPP15309 386 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 ALOX15P16050 662 aaPredicted RBP9.41□□□□□ -0.9
NUP54-203ENST00000504173 SDC1P18827 310 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 MAOAP21397 527 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 MMP11P24347 488 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 PPP2R1BP30154 601 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 HNRNPFP52597 415 aaKnown RBP9.41□□□□□ -0.9
NUP54-203ENST00000504173 AQP5P55064 265 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 HSD17B7P56937 341 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 ERVK-8P63133 956 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 GNGT1P63211 74 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 BTG2P78543 158 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 RHAGQ02094 409 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 EMX2Q04743 252 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 C2orf80Q0P641 193 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 KCNAB2Q13303 367 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 IL10RAQ13651 578 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 NSDHLQ15738 373 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 UGT8Q16880 541 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 SMU1Q2TAY7 513 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 IL23RQ5VWK5 629 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 OR52E8Q6IFG1 317 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 EPGNQ6UW88 154 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 QSOX2Q6ZRP7 698 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 RIPOR1Q6ZS17 1223 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 ACAD11Q709F0 780 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 LARP4Q71RC2 724 aaKnown RBP eCLIP9.41□□□□□ -0.9
NUP54-203ENST00000504173 MED25Q71SY5 747 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 CLNKQ7Z7G1 428 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 LRRC34Q8IZ02 419 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 MMP21Q8N119 569 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 TMEM132CQ8N3T6 1108 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 LIX1Q8N485 282 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 PLPP5Q8NEB5 264 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 CLHC1Q8NHS4 586 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 TANKQ92844 425 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 TSLPQ969D9 159 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 MAELQ96JY0 434 aaKnown RBP9.41□□□□□ -0.9
NUP54-203ENST00000504173 TSSK3Q96PN8 268 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 SIKE1Q9BRV8 207 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 NOP53Q9NZM5 478 aaKnown RBP9.41□□□□□ -0.9
NUP54-203ENST00000504173 C19orf25Q9UFG5 118 aaPredicted RBP9.41□□□□□ -0.9
NUP54-203ENST00000504173 DCTN4Q9UJW0 460 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 WBP11Q9Y2W2 641 aaKnown RBP9.41□□□□□ -0.9
NUP54-203ENST00000504173 PCDHA9Q9Y5H5 950 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 SCN2AQ99250 2005 aa9.41□□□□□ -0.9
NUP54-203ENST00000504173 AKAP9Q99996 3911 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 ANKHD1Q8IWZ3 2542 aaKnown RBP9.4□□□□□ -0.9
NUP54-203ENST00000504173 A1L4Q6 167 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 PEX12O00623 359 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 PCDH17O14917 1159 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 NKX2-8O15522 239 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 CTNSO60931 367 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 LDB3O75112 727 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 DRD2P14416 443 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 TACR1P25103 407 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 COL8A1P27658 744 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 ASMTP46597 345 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 IDH3AP50213 366 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 EFNA3P52797 238 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 ID2Q02363 134 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 EEF1A2Q05639 463 aaKnown RBP9.4□□□□□ -0.9
NUP54-203ENST00000504173 ACTN3Q08043 901 aaPredicted RBP9.4□□□□□ -0.9
NUP54-203ENST00000504173 CDC20Q12834 499 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 STX4Q12846 297 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 HEPACAMQ14CZ8 416 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 LSM12Q3MHD2 195 aaKnown RBP9.4□□□□□ -0.9
NUP54-203ENST00000504173 FAM71E1Q6IPT2 247 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 OGFOD2Q6N063 350 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 LANCL3Q6ZV70 420 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 IKBIPQ70UQ0 350 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 SPATA19Q7Z5L4 167 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 PPP1R32Q7Z5V6 425 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 MRGPREQ86SM8 312 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 SCUBE1Q8IWY4 988 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 PARP9Q8IXQ6 854 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 CEP70Q8NHQ1 597 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 RFWD2Q8NHY2 731 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 ACTRT2Q8TDY3 377 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 GFM2Q969S9 779 aaKnown RBP9.4□□□□□ -0.9
NUP54-203ENST00000504173 CHMP6Q96FZ7 201 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 VPS50Q96JG6 964 aa9.4□□□□□ -0.9
NUP54-203ENST00000504173 IP6K3Q96PC2 410 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms