RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 ITPAQ9BY32 194 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 RBM38Q9H0Z9 239 aaKnown RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 NTN4Q9HB63 628 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 IMP3Q9NV31 184 aaKnown RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 TMPRSS11EQ9UL52 423 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 LTBP2Q14767 1821 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 PRR23AA6NEV1 266 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 AP3D1O14617 1153 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 EMC8O43402 210 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 IL3P08700 152 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 IFI6P09912 130 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ERGP11308 486 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ARSAP15289 507 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 TACR1P25103 407 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 GGT2P36268 569 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 VIPR2P41587 438 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 RHAGQ02094 409 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 PTPRRQ15256 657 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ANKRD54Q6NXT1 300 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ZNF367Q7RTV3 350 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 TMCO2Q7Z6W1 182 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 PDXPQ96GD0 296 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 COPS4Q9BT78 406 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 GSDMCQ9BYG8 508 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 UCK2Q9BZX2 261 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 DDX31Q9H8H2 851 aaKnown RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 SMURF2Q9HAU4 748 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 RAPGEFL1Q9UHV5 662 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 MAP4K5Q9Y4K4 846 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 CLDN24A6NM45 220 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 C12orf71A8MTZ7 269 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ISM1B1AKI9 464 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 hCG_2039718K7EN88 272 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 SYT5O00445 386 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 B3GALT2O43825 422 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 TRIM23P36406 574 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 NR4A2P43354 598 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 RPP38P78345 283 aaKnown RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 CD47Q08722 323 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 DNASE1L3Q13609 305 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 NFE2L1Q14494 772 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 NCF4Q15080 339 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 IQCCQ4KMZ1 466 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 TMEM215Q68D42 235 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 KIAA1211LQ6NV74 962 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 FAHD1Q6P587 224 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ZCCHC12Q6PEW1 402 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 PTCHD4Q6ZW05 846 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 CHST15Q7LFX5 561 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 SZRD1Q7Z422 152 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 NRROSQ86YC3 692 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 MSRB3Q8IXL7 192 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 SPARTQ8N0X7 666 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 OR8H2Q8N162 312 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 SLC43A2Q8N370 569 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ZNF784Q8NCA9 323 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 OR2L5Q8NG80 312 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 NFKBIDQ8NI38 313 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 UTP15Q8TED0 518 aaKnown RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 CDADC1Q9BWV3 514 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 SRMSQ9H3Y6 488 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 INIPQ9NRY2 104 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 DGKBQ9Y6T7 804 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ATP6V1G2-DDX39BF2Z307 99 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 GNB5O14775 395 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 DYRK3O43781 588 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 SSX5O60225 188 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 TNFP01375 233 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 HMGN1P05114 100 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 RPLP0P05388 317 aaKnown RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 HLA-EP13747 358 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 EFNA1P20827 205 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 CTSKP43235 329 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 PXNP49023 591 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 LRRC32Q14392 662 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 RPL13AP3Q6NVV1 102 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 RFLNAQ6ZTI6 216 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 C6orf120Q7Z4R8 191 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 Q8N9G6 341 aaPredicted RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 MFSD9Q8NBP5 474 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 OR4K1Q8NGD4 311 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 MUL1Q969V5 352 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 GAL3ST3Q96A11 431 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ZHX1-C8orf76Q96EF9 292 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ZSWIM3Q96MP5 696 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ZNF285Q96NJ3 590 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 ALPK1Q96QP1 1244 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 APOOQ9BUR5 198 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 MMP27Q9H306 513 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 C14orf105Q9NVL8 296 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 POU2F3Q9UKI9 436 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 NDRG4Q9ULP0 352 aaKnown RBP7.05□□□□□ -1.28
PDGFC-203ENST00000502773 PEX16Q9Y5Y5 336 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 HS3ST3A1Q9Y663 406 aa7.05□□□□□ -1.28
PDGFC-203ENST00000502773 MYL12AP19105 171 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 PDHA2P29803 388 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 PKLRP30613 574 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 ATP6V1E1P36543 226 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 HMGA2P52926 109 aa7.04□□□□□ -1.28
PDGFC-203ENST00000502773 CDH12P55289 794 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms