RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 NTNG1Q9Y2I2 539 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 ZNF462Q96JM2 2506 aa11.92□□□□□ -0.5
HSPG2-213ENST00000498495 GNG14A0A1W2PPG7 69 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 ITGA10O75578 1167 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 DDAH2O95865 285 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 SLC35E2P0CK97 266 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 UROSP10746 265 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 GNLYP22749 145 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 XKP51811 444 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 ACSM2AQ08AH3 577 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 ELOAQ14241 798 aaKnown RBP11.91□□□□□ -0.5
HSPG2-213ENST00000498495 ZNF267Q14586 743 aaPredicted RBP11.91□□□□□ -0.5
HSPG2-213ENST00000498495 SPIN4Q56A73 249 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 ZNF468Q5VIY5 522 aaPredicted RBP11.91□□□□□ -0.5
HSPG2-213ENST00000498495 ACSM2BQ68CK6 577 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 SLC25A25Q6KCM7 469 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 HOMEZQ8IX15 550 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 ARMC10Q8N2F6 343 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 BCORP1Q8N888 145 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 ZNF321PQ8N8H1 164 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 TMEM178AQ8NBL3 297 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 OR8K3Q8NH51 312 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 ZNF721Q8TF20 911 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 APIPQ96GX9 242 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 ART5Q96L15 291 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 C5orf34Q96MH7 638 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 BARD1Q99728 777 aaKnown RBP11.91□□□□□ -0.5
HSPG2-213ENST00000498495 TRMOQ9BU70 441 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 FAIM2Q9BWQ8 316 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 LIN28AQ9H9Z2 209 aaKnown RBP11.91□□□□□ -0.5
HSPG2-213ENST00000498495 RRAGDQ9NQL2 400 aaPredicted RBP11.91□□□□□ -0.5
HSPG2-213ENST00000498495 KLHL1Q9NR64 748 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 MCM8Q9UJA3 840 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 YARS2Q9Y2Z4 477 aaKnown RBP11.91□□□□□ -0.5
HSPG2-213ENST00000498495 PCDHGB6Q9Y5F9 930 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 PCDHA9Q9Y5H5 950 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 SPTA1P02549 2419 aa11.91□□□□□ -0.5
HSPG2-213ENST00000498495 WWP2O00308 870 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 TYROBPO43914 113 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 PRKNO60260 465 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-213ENST00000498495 NPHS1O60500 1241 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 CBX6O95503 412 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 CRYABP02511 175 aaKnown RBP11.9□□□□□ -0.5
HSPG2-213ENST00000498495 SP1P08047 785 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 MYZAPP0CAP1 466 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 GALNSP34059 522 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 TRHRP34981 398 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-213ENST00000498495 ALDH9A1P49189 494 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 HLCSP50747 726 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 SSR4P51571 173 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 RNF4P78317 190 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 NR6A1Q15406 480 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 INAQ16352 499 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 MAPKAPK3Q16644 382 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 SLC48A1Q6P1K1 146 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 DGAT2L6Q6ZPD8 337 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 TRIM46Q7Z4K8 759 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 EXOC3L1Q86VI1 746 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 CPAMD8Q8IZJ3 1885 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 MDS2Q8NDY4 140 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 DNAJB8Q8NHS0 232 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 DOK4Q8TEW6 326 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 TMEM125Q96AQ2 219 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 ZBTB9Q96C00 473 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 TAAR6Q96RI8 345 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 MECRQ9BV79 373 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 CNPPD1Q9BV87 410 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 TRIM45Q9H8W5 580 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-213ENST00000498495 EML4Q9HC35 981 aaKnown RBP11.9□□□□□ -0.5
HSPG2-213ENST00000498495 OLAHQ9NV23 265 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.9□□□□□ -0.5
HSPG2-213ENST00000498495 MYOTQ9UBF9 498 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 FIS1Q9Y3D6 152 aa11.9□□□□□ -0.5
HSPG2-213ENST00000498495 ANKUB1A6NFN9 424 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 GOLGA6L10A6NI86 522 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 TMEM200CA6NKL6 621 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 SLC28A1O00337 649 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 AZIN1O14977 448 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 PCDH7O60245 1069 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 ERAL1O75616 437 aaKnown RBP11.89□□□□□ -0.51
HSPG2-213ENST00000498495 OR2J2O76002 312 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 NEURL1O76050 574 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 ZIC2O95409 532 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-213ENST00000498495 CHEK2O96017 543 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 BPGMP07738 259 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 DRD2P14416 443 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 PORP16435 677 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-213ENST00000498495 CSNK2A2P19784 350 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-213ENST00000498495 NT5EP21589 574 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 TIA1P31483 386 aaKnown RBP eCLIP11.89□□□□□ -0.51
HSPG2-213ENST00000498495 UQCRFS1P47985 274 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 ERVK-8P63133 956 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 RAE1P78406 368 aaKnown RBP11.89□□□□□ -0.51
HSPG2-213ENST00000498495 MRPL49Q13405 166 aaKnown RBP11.89□□□□□ -0.51
HSPG2-213ENST00000498495 HEPACAMQ14CZ8 416 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 SPRED3Q2MJR0 410 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 EIF2S3LQ2VIR3 472 aaKnown RBP11.89□□□□□ -0.51
HSPG2-213ENST00000498495 C6orf163Q5TEZ5 329 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 CLEC6AQ6EIG7 209 aa11.89□□□□□ -0.51
HSPG2-213ENST00000498495 LRIG3Q6UXM1 1119 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms