RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 THAP3Q8WTV1 239 aaPredicted RBP14.29□□□□□ -0.12
NUP50-219ENST00000497960 TMEM125Q96AQ2 219 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 SCMH1Q96GD3 660 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 SERPINI1Q99574 410 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 TRMOQ9BU70 441 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 MED4Q9NPJ6 270 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 PSD3Q9NYI0 1048 aa14.29□□□□□ -0.12
NUP50-219ENST00000497960 COL12A1Q99715 3063 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 SPENQ96T58 3664 aaKnown RBP14.28□□□□□ -0.12
NUP50-219ENST00000497960 A0A1B0GTL3 188 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 MYOCOSA0A1B0GUC4 107 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 PPP6CO00743 305 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 NPHS1O60500 1241 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 SLC25A12O75746 678 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 NEURL1O76050 574 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 SERPINE1P05121 402 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 COX7A2P14406 83 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 BGNP21810 368 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 TRHRP34981 398 aaPredicted RBP14.28□□□□□ -0.12
NUP50-219ENST00000497960 BUD31P41223 144 aaPredicted RBP14.28□□□□□ -0.12
NUP50-219ENST00000497960 HLCSP50747 726 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 GPR143P51810 404 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 TDGF1P3P51864 188 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 NEK2P51955 445 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 PMP22Q01453 160 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 ID2Q02363 134 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 IFT88Q13099 833 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 MAPKAPK3Q16644 382 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 C4orf17Q53FE4 359 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 C10orf62Q5T681 223 aaPredicted RBP14.28□□□□□ -0.12
NUP50-219ENST00000497960 ZNF468Q5VIY5 522 aaPredicted RBP14.28□□□□□ -0.12
NUP50-219ENST00000497960 FRG2Q64ET8 278 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 CYP20A1Q6UW02 462 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 GALNTL5Q7Z4T8 443 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 ARMC10Q8N2F6 343 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 TMEM156Q8N614 296 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 CDYL2Q8N8U2 506 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 MORN4Q8NDC4 146 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 WDR20Q8TBZ3 569 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 FRG2BQ96QU4 278 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 HES7Q9BYE0 225 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 SHCBP1LQ9BZQ2 653 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 ELOVL6Q9H5J4 265 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 RPF2Q9H7B2 306 aaKnown RBP14.28□□□□□ -0.12
NUP50-219ENST00000497960 TRIM45Q9H8W5 580 aaPredicted RBP14.28□□□□□ -0.12
NUP50-219ENST00000497960 LYARQ9NX58 379 aaKnown RBP14.28□□□□□ -0.12
NUP50-219ENST00000497960 SEC14L3Q9UDX4 400 aa14.28□□□□□ -0.12
NUP50-219ENST00000497960 C17orf105B2RV13 164 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 H3BQF6 201 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 DYRK3O43781 588 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 ITGA10O75578 1167 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 ESRRBO95718 433 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 LDLRP01130 860 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 ENO1P06733 434 aaKnown RBP14.27□□□□□ -0.13
NUP50-219ENST00000497960 MST1P26927 711 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 SERPINB5P36952 375 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 PER3P56645 1201 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 WDR4P57081 412 aaKnown RBP14.27□□□□□ -0.13
NUP50-219ENST00000497960 KCNK10P57789 538 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 TNFRSF17Q02223 184 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 ALDH6A1Q02252 535 aaKnown RBP14.27□□□□□ -0.13
NUP50-219ENST00000497960 BIKQ13323 160 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 HSDL2Q6YN16 418 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 NUDT13Q86X67 352 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 PTPMT1Q8WUK0 201 aaPredicted RBP14.27□□□□□ -0.13
NUP50-219ENST00000497960 DYDC1Q8WWB3 177 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 TANKQ92844 425 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 ANKRD9Q96BM1 317 aaPredicted RBP14.27□□□□□ -0.13
NUP50-219ENST00000497960 MTFMTQ96DP5 389 aaKnown RBP14.27□□□□□ -0.13
NUP50-219ENST00000497960 DGAT2Q96PD7 388 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 OR8D2Q9GZM6 311 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 DDX31Q9H8H2 851 aaKnown RBP14.27□□□□□ -0.13
NUP50-219ENST00000497960 WDR41Q9HAD4 459 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 EML4Q9HC35 981 aaKnown RBP14.27□□□□□ -0.13
NUP50-219ENST00000497960 ZNF225Q9UK10 706 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 ZNF223Q9UK11 482 aaPredicted RBP14.27□□□□□ -0.13
NUP50-219ENST00000497960 PPT2Q9UMR5 302 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 SNX6Q9UNH7 406 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 YARS2Q9Y2Z4 477 aaKnown RBP14.27□□□□□ -0.13
NUP50-219ENST00000497960 FIS1Q9Y3D6 152 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 ATG4BQ9Y4P1 393 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 DOPEY1Q5JWR5 2465 aa14.27□□□□□ -0.13
NUP50-219ENST00000497960 A0A0A6YYD5 115 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 A0A1B0GUH1 482 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 ASPDHA6ND91 283 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 TMEM114B3SHH9 223 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 UBFD1O14562 309 aaKnown RBP14.26□□□□□ -0.13
NUP50-219ENST00000497960 LRRTM2O43300 516 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 FGF17O60258 216 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 NME2P1O60361 137 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 EEDO75530 441 aaKnown RBP14.26□□□□□ -0.13
NUP50-219ENST00000497960 SEMA3DO95025 777 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 UNC5CO95185 931 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 ETHE1O95571 254 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 HSPA4LO95757 839 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 KRT6AP02538 564 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 KRT6BP04259 564 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 CHRNGP07510 517 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 STSP08842 583 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 RNF224P0DH78 156 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms