RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 PTPRCP08575 1304 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 A0A0G2JLL6 359 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 SUPT3HB4E1H0 165 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 CCL24O00175 119 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 ARPC1BO15143 372 aaKnown RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 RNF13O43567 381 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 OR1F1O43749 312 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 TRIM3O75382 744 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 PAPSS2O95340 614 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 TXNDC12O95881 172 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 CSTAP01040 98 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 KRT6AP02538 564 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 H1F0P07305 194 aaKnown RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 ALPIP09923 528 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 CD59P13987 128 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 AMD1P17707 334 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 GNLYP22749 145 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 SEC61GP60059 68 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 CX3CL1P78423 397 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 DMPKQ09013 629 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 DHX34Q14147 1143 aaKnown RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 CTTNQ14247 550 aaKnown RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 HEPACAMQ14CZ8 416 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 HERC3Q15034 1050 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 CAMK4Q16566 473 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 MAPK6Q16659 721 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 PHKG1Q16816 387 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 PHLDA2Q53GA4 152 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 PAPPA-AS1Q5QFB9 102 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 LIN9Q5TKA1 542 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 KIAA1161Q6NSJ0 714 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 ANO5Q75V66 913 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 MON1BQ7L1V2 547 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 CENPQQ7L2Z9 268 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 SPATA24Q86W54 205 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 PRSS35Q8N3Z0 413 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 GBGT1Q8N5D6 347 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 RNF149Q8NC42 400 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 OR11H4Q8NGC9 324 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 OR6M1Q8NGM8 313 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 SLC38A5Q8WUX1 472 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 LIPHQ8WWY8 451 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 EFHD2Q96C19 240 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 HPDLQ96IR7 371 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 PDLIM2Q96JY6 352 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 DEFB118Q96PH6 123 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 ADOQ96SZ5 270 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 RIOK1Q9BRS2 568 aaKnown RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 NDUFAF3Q9BU61 184 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 GSDMCQ9BYG8 508 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 SLITRK6Q9H5Y7 841 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 AUNIPQ9H7T9 357 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 TLE6Q9H808 572 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 PARPBPQ9NWS1 579 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 WNT16Q9UBV4 365 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 PEF1Q9UBV8 284 aaKnown RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 EPHA6Q9UF33 1036 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 CDH9Q9ULB4 789 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 SRPRBQ9Y5M8 271 aaKnown RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 ARHGEF28Q8N1W1 1705 aaKnown RBP5.57□□□□□ -1.52
BRCA1-224ENST00000497488 FMN2Q9NZ56 1722 aa5.57□□□□□ -1.52
BRCA1-224ENST00000497488 USP32Q8NFA0 1604 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 IL16Q14005 1332 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 ADGRB2O60241 1585 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 LOC105371242A0A075B767 164 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 A0A087WUV0 522 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-224ENST00000497488 ATP6AP2A0A1C7CYW4 349 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 OR5K3A6NET4 321 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 A6NNC1 897 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 C15orf62A8K5M9 175 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 CLDN5O00501 218 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 ZSCAN12O43309 604 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 JAK2O60674 1132 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 CRYGCP07315 174 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 GSTA2P09210 222 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 CCDC172P0C7W6 258 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 FOSL2P15408 326 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 CYP11B1P15538 503 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 GCFC2P16383 781 aaKnown RBP5.56□□□□□ -1.52
BRCA1-224ENST00000497488 TPSB2P20231 275 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 CD1BP29016 333 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 NMT1P30419 496 aaKnown RBP5.56□□□□□ -1.52
BRCA1-224ENST00000497488 SFTPDP35247 375 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 ATP5C1P36542 298 aaKnown RBP5.56□□□□□ -1.52
BRCA1-224ENST00000497488 STARP49675 285 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 LINC00310P59036 64 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 PDE1BQ01064 536 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 NHLH1Q02575 133 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 EXOSC2Q13868 293 aaKnown RBP5.56□□□□□ -1.52
BRCA1-224ENST00000497488 R3HDM1Q15032 1099 aaKnown RBP5.56□□□□□ -1.52
BRCA1-224ENST00000497488 TPSAB1Q15661 275 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 ZNF284Q2VY69 593 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 ATL3Q6DD88 541 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 TMEM225Q6GV28 225 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 CTR9Q6PD62 1173 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 DEF8Q6ZN54 512 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 CYP4V2Q6ZWL3 525 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-224ENST00000497488 RHOUQ7L0Q8 258 aa5.56□□□□□ -1.52
BRCA1-224ENST00000497488 TRMT1LQ7Z2T5 733 aaKnown RBP5.56□□□□□ -1.52
BRCA1-224ENST00000497488 GRASPQ7Z6J2 395 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms