RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 GOLGA8MH3BSY2 632 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 RAB27BO00194 218 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 CCL22O00626 93 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 NTN3O00634 580 aaPredicted RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 LIN7AO14910 233 aaPredicted RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 TM9SF1O15321 606 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 KIF1CO43896 1103 aaKnown RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 MGRN1O60291 552 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 SPAG7O75391 227 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 CIB2O75838 187 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 VAPBO95292 243 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 RPN2P04844 631 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 ITGA2BP08514 1039 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 CSTF2P33240 577 aaKnown RBP eCLIP4.32□□□□□ -1.724e-13■■■■■ 28.5
RBM39-240ENST00000495293 GRIA1P42261 906 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 PTDSS1P48651 473 aaKnown RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 PRLHRP49683 370 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 CTSCP53634 463 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 NR1H2P55055 460 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 POLE2P56282 527 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 B4GALNT1Q00973 533 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 DMPKQ09013 629 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 BNIP1Q12981 228 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 PRKAA1Q13131 559 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 RPA4Q13156 261 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 MSLNQ13421 630 aaPredicted RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 TRA2AQ13595 282 aaKnown RBP eCLIP4.32□□□□□ -1.727e-12■□□□□ 8.6
RBM39-240ENST00000495293 NFE2L1Q14494 772 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 PDK4Q16654 411 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 ST3GAL2Q16842 350 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 BCL7AQ4VC05 210 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 AWAT1Q58HT5 328 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 ATG16L1Q676U5 607 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 AWAT2Q6E213 333 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 PTRHD1Q6GMV3 140 aaKnown RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 TMEM71Q6P5X7 295 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 TTC23LQ6PF05 361 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 KLHL17Q6TDP4 642 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 C3orf62Q6ZUJ4 267 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 TMEM26Q6ZUK4 368 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 RAB11FIP2Q7L804 512 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 LRRC6Q86X45 466 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 C17orf82Q86X59 251 aaPredicted RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 ZNF547Q8IVP9 402 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 FBXO39Q8N4B4 442 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 RAB42Q8N4Z0 105 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 TEX9Q8N6V9 391 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 PNLDC1Q8NA58 520 aaKnown RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 MCUQ8NE86 351 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 RP9Q8TA86 221 aaKnown RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 HM13Q8TCT9 377 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 SLC37A2Q8TED4 501 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 ZFPM2Q8WW38 1151 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 ASZ1Q8WWH4 475 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 PATE1Q8WXA2 126 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 CPT1BQ92523 772 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 NCSTNQ92542 709 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 ELMO1Q92556 727 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 ZDHHC12Q96GR4 267 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 ATXN7L3BQ96GX2 97 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 RITA1Q96K30 269 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 LINC00615Q96LM1 132 aaPredicted RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 C12orf66Q96MD2 445 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 ZNF578Q96N58 590 aaPredicted RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 PANX3Q96QZ0 392 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 PRPF18Q99633 342 aaKnown RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 THAP7Q9BT49 309 aaPredicted RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 NAT9Q9BTE0 207 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 DPCDQ9BVM2 203 aaPredicted RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 KIFC1Q9BW19 673 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 WWP1Q9H0M0 922 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 CCDC68Q9H2F9 335 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 CXorf56Q9H5V9 222 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 POLR1BQ9H9Y6 1135 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 UCK1Q9HA47 277 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 MRM3Q9HC36 420 aaKnown RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 THSD1Q9NS62 852 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 ABCF3Q9NUQ8 709 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 IMP3Q9NV31 184 aaKnown RBP4.32□□□□□ -1.72
RBM39-240ENST00000495293 ELOVL5Q9NYP7 299 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 TXNDC16Q9P2K2 825 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 SLC23A2Q9UGH3 650 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 FETUBQ9UGM5 382 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 GNPTGQ9UJJ9 305 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 MID2Q9UJV3 735 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 PSMD13Q9UNM6 376 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 U3KQA8 63 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 DNAH14Q0VDD8 3507 aa4.32□□□□□ -1.72
RBM39-240ENST00000495293 PTPRBP23467 1997 aa4.31□□□□□ -1.72
RBM39-240ENST00000495293 SCN8AQ9UQD0 1980 aa4.31□□□□□ -1.72
RBM39-240ENST00000495293 IGHV1OR21-1A0A087WYE8 117 aa4.31□□□□□ -1.72
RBM39-240ENST00000495293 TRBV5-4A0A0C4DH59 114 aa4.31□□□□□ -1.72
RBM39-240ENST00000495293 FAM237BA0A1B0GVD1 139 aa4.31□□□□□ -1.72
RBM39-240ENST00000495293 A0A1W2PQM1 296 aa4.31□□□□□ -1.72
RBM39-240ENST00000495293 TCRBV7S3A2A0A539 114 aa4.31□□□□□ -1.72
RBM39-240ENST00000495293 PABPN1LA6NDY0 278 aaKnown RBP4.31□□□□□ -1.72
RBM39-240ENST00000495293 OR51F1A6NGY5 319 aa4.31□□□□□ -1.72
RBM39-240ENST00000495293 LILRA5A6NI73 299 aa4.31□□□□□ -1.72
RBM39-240ENST00000495293 OR52A4PA6NMU1 304 aa4.31□□□□□ -1.72
RBM39-240ENST00000495293 A8MU76 341 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms