RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 DGAT2L6Q6ZPD8 337 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 TBC1D1Q86TI0 1168 aaPredicted RBP20.37■□□□□ 0.85
HDDC3-203ENST00000494993 CLYBLQ8N0X4 340 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 SLC15A4Q8N697 577 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 PPM1NQ8N819 430 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 HUS1BQ8NHY5 278 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 PAQR8Q8TEZ7 354 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 TANKQ92844 425 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 RGMAQ96B86 450 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 PPWD1Q96BP3 646 aaKnown RBP20.37■□□□□ 0.85
HDDC3-203ENST00000494993 RBM18Q96H35 190 aaKnown RBP20.37■□□□□ 0.85
HDDC3-203ENST00000494993 FBXL20Q96IG2 436 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 SLC24A3Q9HC58 644 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 PHF11Q9UIL8 331 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.37■□□□□ 0.85
HDDC3-203ENST00000494993 MTORP42345 2549 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 AKAP6Q13023 2319 aa20.37■□□□□ 0.85
HDDC3-203ENST00000494993 TRGV5A0A0B4J1U4 118 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 A0A0G2JNJ9 132 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 HRKO00198 91 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 PLPP1O14494 284 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 RAD51CO43502 376 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 HCN1O60741 890 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 LTA4HP09960 611 aaKnown RBP20.36■□□□□ 0.85
HDDC3-203ENST00000494993 EPB42P16452 691 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 C1orf185Q5T7R7 199 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 WLSQ5T9L3 541 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 C18orf63Q68DL7 685 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 MAATS1Q7Z4T9 603 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 GPR180Q86V85 440 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 TMEM200AQ86VY9 491 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 ZCCHC7Q8N3Z6 543 aaKnown RBP20.36■□□□□ 0.85
HDDC3-203ENST00000494993 SPACA9Q96E40 222 aaPredicted RBP20.36■□□□□ 0.85
HDDC3-203ENST00000494993 CENPKQ9BS16 269 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 EXO5Q9H790 373 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 IGSF5Q9NSI5 407 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.36■□□□□ 0.85
HDDC3-203ENST00000494993 Q9UFV3 132 aa20.36■□□□□ 0.85
HDDC3-203ENST00000494993 ALOX15P16050 662 aaPredicted RBP20.35■□□□□ 0.85
HDDC3-203ENST00000494993 ENDOUP21128 410 aaKnown RBP20.35■□□□□ 0.85
HDDC3-203ENST00000494993 CRABP2P29373 138 aa20.35■□□□□ 0.85
HDDC3-203ENST00000494993 TLX1P31314 330 aaPredicted RBP20.35■□□□□ 0.85
HDDC3-203ENST00000494993 PIK3CBP42338 1070 aa20.35■□□□□ 0.85
HDDC3-203ENST00000494993 HNRNPH2P55795 449 aaKnown RBP20.35■□□□□ 0.85
HDDC3-203ENST00000494993 TBL3Q12788 808 aaKnown RBP20.35■□□□□ 0.85
HDDC3-203ENST00000494993 MYBPHQ13203 477 aa20.35■□□□□ 0.85
HDDC3-203ENST00000494993 PRAMEF20Q5VT98 475 aa20.35■□□□□ 0.85
HDDC3-203ENST00000494993 ST13P4Q8IZP2 240 aaPredicted RBP20.35■□□□□ 0.85
HDDC3-203ENST00000494993 FBXW8Q8N3Y1 598 aa20.35■□□□□ 0.85
HDDC3-203ENST00000494993 ZNF703Q9H7S9 590 aaPredicted RBP20.35■□□□□ 0.85
HDDC3-203ENST00000494993 DMRT3Q9NQL9 472 aa20.35■□□□□ 0.85
HDDC3-203ENST00000494993 SPRR3Q9UBC9 169 aa20.35■□□□□ 0.85
HDDC3-203ENST00000494993 BOKQ9UMX3 212 aaPredicted RBP20.35■□□□□ 0.85
HDDC3-203ENST00000494993 TSC22D4Q9Y3Q8 395 aa20.35■□□□□ 0.85
HDDC3-203ENST00000494993 PRKRAO75569 313 aaKnown RBP20.34■□□□□ 0.85
HDDC3-203ENST00000494993 MTHFD2P13995 350 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 CD1EP15812 388 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 ADH7P40394 386 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 ARFIP1P53367 373 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 HERVK_113P63132 956 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 ERVK-8P63133 956 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 KCNJ2P63252 427 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 MYLK4Q86YV6 388 aaPredicted RBP20.34■□□□□ 0.85
HDDC3-203ENST00000494993 LIX1LQ8IVB5 337 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 DND1Q8IYX4 353 aaKnown RBP20.34■□□□□ 0.85
HDDC3-203ENST00000494993 TEX9Q8N6V9 391 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 DOK4Q8TEW6 326 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 NXNL1Q96CM4 212 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 MTERF1Q99551 399 aaKnown RBP20.34■□□□□ 0.85
HDDC3-203ENST00000494993 PELOQ9BRX2 385 aaKnown RBP20.34■□□□□ 0.85
HDDC3-203ENST00000494993 CNPPD1Q9BV87 410 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 ERVK-6Q9BXR3 956 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 ZFP64Q9NPA5 681 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 ERVK-19Q9WJR5 959 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 PCDHGA11Q9Y5H2 935 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 ANKHD1Q8IWZ3 2542 aaKnown RBP20.34■□□□□ 0.85
HDDC3-203ENST00000494993 ITPR3Q14573 2671 aa20.34■□□□□ 0.85
HDDC3-203ENST00000494993 PROM1O43490 865 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 FBXO45P0C2W1 286 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 RFPL3SP0C7P2 107 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 GABRA1P14867 456 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 BUD31P41223 144 aaPredicted RBP20.33■□□□□ 0.85
HDDC3-203ENST00000494993 SPRED3Q2MJR0 410 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 SLC25A35Q3KQZ1 300 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 LIPJQ5W064 366 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 RNF111Q6ZNA4 994 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 SLC29A4Q7RTT9 530 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 LRRC25Q8N386 305 aaPredicted RBP20.33■□□□□ 0.85
HDDC3-203ENST00000494993 SPATA4Q8NEY3 305 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 MYRIPQ8NFW9 859 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 FBF1Q8TES7 1133 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 GAL3ST4Q96RP7 486 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 ZNF717Q9BY31 904 aaPredicted RBP20.33■□□□□ 0.85
HDDC3-203ENST00000494993 PROK2Q9HC23 129 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 RYDENQ9NUL5 291 aaKnown RBP20.33■□□□□ 0.85
HDDC3-203ENST00000494993 ALKBH4Q9NXW9 302 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 CNIH4Q9P003 139 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 ANGPTL3Q9Y5C1 460 aa20.33■□□□□ 0.85
HDDC3-203ENST00000494993 CHCHD2Q9Y6H1 151 aaPredicted RBP20.33■□□□□ 0.85
HDDC3-203ENST00000494993 IQANK1A0A1B0GTG1 560 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms