RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 ISL2Q96A47 359 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 PPWD1Q96BP3 646 aaKnown RBP12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 SENP5Q96HI0 755 aaPredicted RBP12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 NSUN5Q96P11 429 aaKnown RBP12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 CDK15Q96Q40 435 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 DMRTA2Q96SC8 542 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 VPS11Q9H270 941 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 LDAHQ9H6V9 325 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 IPPKQ9H8X2 491 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 IL1RL2Q9HB29 575 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 LYARQ9NX58 379 aaKnown RBP12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 CPSF2Q9P2I0 782 aaKnown RBP12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 TMCO1Q9UM00 188 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 RNF11Q9Y3C5 154 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 TSC22D4Q9Y3Q8 395 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 ATG4BQ9Y4P1 393 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 PDZD2O15018 2839 aa12.4□□□□□ -0.42
CTDSP1-212ENST00000494067 FAM166BA8MTA8 275 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 H0YIV9 168 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 BCKDKO14874 412 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 ACSL3O95573 720 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 RBP1P09455 135 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 SBK3P0C264 359 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 BSGP35613 385 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 NEK2P51955 445 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 TNFRSF17Q02223 184 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 GTF3C1Q12789 2109 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 GTF2H2Q13888 395 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 PCBP2Q15366 365 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■■□□ 15.7
CTDSP1-212ENST00000494067 CPSF6Q16630 551 aaKnown RBP eCLIP12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 TTC19Q6DKK2 380 aaPredicted RBP12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 MRM1Q6IN84 353 aaKnown RBP12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 GTF2H2CQ6P1K8 395 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 ACAD11Q709F0 780 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 SLC29A4Q7RTT9 530 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 RELL1Q8IUW5 271 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 DND1Q8IYX4 353 aaKnown RBP12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 FAM109AQ8N4B1 249 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 RPRMLQ8N4K4 120 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 MMGT1Q8N4V1 131 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 UHMK1Q8TAS1 419 aaKnown RBP12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 WDR20Q8TBZ3 569 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 SLC44A1Q8WWI5 657 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 SCYL1Q96KG9 808 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 SPOCK3Q9BQ16 436 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 TTTY12Q9BZ98 90 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 EXO5Q9H790 373 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 ZBTB26Q9HCK0 441 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 PLSCR2Q9NRY7 297 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 APCP25054 2843 aa12.39□□□□□ -0.43
CTDSP1-212ENST00000494067 A0A0A6YYD5 115 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 OR14I1A6ND48 311 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 FIGNL2A6NMB9 653 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 NPIPA2E9PIF3 369 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 NPIPA3F8WFD2 350 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 PPP6CO00743 305 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 CLDN9O95484 217 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 NADKO95544 446 aaPredicted RBP12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 CLPSP04118 112 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 IGKV3-11P04433 115 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 INHBAP08476 426 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 GCAP28676 217 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 SERPINB3P29508 390 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 CHRNB4P30926 498 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 FOLH1Q04609 750 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 ASPHQ12797 758 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 CUL3Q13618 768 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 SLC10A1Q14973 349 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 WHAMMP3Q1A5X7 153 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 PIGGQ5H8A4 983 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 C6orf163Q5TEZ5 329 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 SLC22A10Q63ZE4 541 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 ADGRD1Q6QNK2 874 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 LYPD8Q6UX82 237 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 NUDT13Q86X67 352 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 C9orf40Q8IXQ3 194 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 ST13P4Q8IZP2 240 aaPredicted RBP12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 TMEM151AQ8N4L1 468 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 PTGR2Q8N8N7 351 aaPredicted RBP12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 L3MBTL4Q8NA19 623 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 OR5M3Q8NGP4 307 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 DCAKDQ8WVC6 231 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 PAFAH2Q99487 392 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 SERPINI1Q99574 410 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 CNPPD1Q9BV87 410 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 PSD3Q9NYI0 1048 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 AHSPQ9NZD4 102 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 ASB4Q9Y574 426 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 LIPGQ9Y5X9 500 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 DCHS2Q6V1P9 2916 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 NOTCH2Q04721 2471 aa12.38□□□□□ -0.43
CTDSP1-212ENST00000494067 A0A1W2PR48 441 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 GLOD5A6NK44 160 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 CAPN14A8MX76 684 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 FOXO6A8MYZ6 492 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 FOXE1O00358 373 aaPredicted RBP12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 PROM1O43490 865 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 SMIM24O75264 130 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 GPR75O95800 540 aa12.37□□□□□ -0.43
CTDSP1-212ENST00000494067 GBAP04062 536 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms