RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 CNDP2Q96KP4 475 aaKnown RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 TGM7Q96PF1 710 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 TRAPPC9Q96Q05 1148 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 FRG2BQ96QU4 278 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 OR52B2Q96RD2 323 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 HBEGFQ99075 208 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 MTERF1Q99551 399 aaKnown RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 MAP3K3Q99759 626 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 AIF1LQ9BQI0 150 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 CCDC3Q9BQI4 270 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 EBF4Q9BQW3 602 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 NUDT22Q9BRQ3 303 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 EFCAB11Q9BUY7 163 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 TMEM120AQ9BXJ8 343 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 NUF2Q9BZD4 464 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 NSRP1Q9H0G5 558 aaKnown RBP6.24□□□□□ -1.41
TRA2B-216ENST00000493864 EHD1Q9H4M9 534 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 NT5DC2Q9H857 520 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 SYNPO2LQ9H987 977 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 TCF7L1Q9HCS4 588 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 TMEM9Q9P0T7 183 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 EPHA6Q9UF33 1036 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 GIMAP2Q9UG22 337 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 ACACBO00763 2458 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 PTPRBP23467 1997 aa6.24□□□□□ -1.41
TRA2B-216ENST00000493864 SEC16AO15027 2179 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 MDC1Q14676 2089 aaKnown RBP6.23□□□□□ -1.41
TRA2B-216ENST00000493864 IGHV5-51A0A0C4DH38 117 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 A0A0G2JND7 137 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 ATP6AP2A0A1C7CYW4 349 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 A0A1W2PQM1 296 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 TRBC2A0A5B9 178 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 OR2A25A4D2G3 310 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 A8MU76 341 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 MAGEB17A8MXT2 336 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 SDHDO14521 159 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 NDUFAB1O14561 156 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 HAT1O14929 419 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 ZW10O43264 779 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 HCRTR1O43613 425 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 DUX1O43812 170 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 CTSVO60911 334 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 CBFA2T3O75081 653 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 ATP6AP2O75787 350 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 CHEK2O96017 543 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 STATHP02808 62 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 RPLP0P05388 317 aaKnown RBP6.23□□□□□ -1.41
TRA2B-216ENST00000493864 CDH3P22223 829 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 HRH2P25021 359 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 CXCR2P25025 360 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 GZMKP49863 264 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 ARFIP2P53365 341 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 RPS13P62277 151 aaKnown RBP6.23□□□□□ -1.41
TRA2B-216ENST00000493864 FOXL1Q12952 345 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 IFT88Q13099 833 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 TUBB3Q13509 450 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 DDX39BQ13838 428 aaKnown RBP6.23□□□□□ -1.41
TRA2B-216ENST00000493864 FAM214AQ32MH5 1076 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 PAGE2BQ5JRK9 111 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 STPG1Q5TH74 334 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 CACHD1Q5VU97 1274 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 WDR74Q6RFH5 385 aaPredicted RBP6.23□□□□□ -1.41
TRA2B-216ENST00000493864 TMIGD1Q6UXZ0 262 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 Q6ZSR9 355 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 PIP4P1Q86T03 277 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 PLXDC1Q8IUK5 500 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 NAXDQ8IW45 347 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 LAS2Q8IYD9 372 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 KIRREL3Q8IZU9 778 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 KRT78Q8N1N4 520 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 OR2T11Q8NH01 316 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 HUS1BQ8NHY5 278 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 C10orf82Q8WW14 230 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 SELENOMQ8WWX9 145 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 CCT6BQ92526 530 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 NAT6Q93015 286 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 UBE2E3Q969T4 207 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 ZUFSPQ96AP4 578 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 ZDHHC12Q96GR4 267 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 RILPQ96NA2 401 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 FCRL4Q96PJ5 515 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 MACROD1Q9BQ69 325 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 RAB33BQ9H082 229 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 ENKD1Q9H0I2 346 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 RHBGQ9H310 441 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 LRRN3Q9H3W5 708 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 ELOVL6Q9H5J4 265 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 LDAHQ9H6V9 325 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 MEAF6Q9HAF1 191 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 BCO1Q9HAY6 547 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 FAM60AQ9NP50 221 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 PILRAQ9UKJ1 303 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 SNX6Q9UNH7 406 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 CCL27Q9Y4X3 112 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 KLK4Q9Y5K2 254 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 IGF2RP11717 2491 aa6.23□□□□□ -1.41
TRA2B-216ENST00000493864 LOC105369274A0A096LPK9 316 aa6.22□□□□□ -1.41
TRA2B-216ENST00000493864 LOC102723532A0A0G2JNH3 316 aa6.22□□□□□ -1.41
TRA2B-216ENST00000493864 A0A0J9YVX5 310 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms