RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 ACP5P13686 325 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 ALDH6A1Q02252 535 aaKnown RBP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 SFSWAPQ12872 951 aaKnown RBP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 TP53BP2Q13625 1128 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 IRF3Q14653 427 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 PUM1Q14671 1186 aaKnown RBP eCLIP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 GANABQ14697 944 aaKnown RBP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 IRF4Q15306 451 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 ZIC1Q15915 447 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 INAQ16352 499 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 UAP1L1Q3KQV9 507 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 ITPRIPL2Q3MIP1 535 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 ZNF404Q494X3 552 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 NDUFAF5Q5TEU4 345 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 TANGO2Q6ICL3 276 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 SDE2Q6IQ49 451 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 KLHL17Q6TDP4 642 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 CASP12Q6UXS9 341 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 ADGRD2Q7Z7M1 963 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 CCDC103Q8IW40 242 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 ZNF513Q8N8E2 541 aaPredicted RBP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 TP53I13Q8NBR0 393 aaPredicted RBP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 MCFD2Q8NI22 146 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 CREB3L4Q8TEY5 395 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 GTPBP3Q969Y2 492 aaKnown RBP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 AMDHD1Q96NU7 426 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 MROQ9BYG7 248 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 OSGEPL1Q9H4B0 414 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 SLAMF7Q9NQ25 335 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 LHX9Q9NQ69 397 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 SIRT3Q9NTG7 399 aaPredicted RBP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 MS4A12Q9NXJ0 267 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 CCDC59Q9P031 241 aaKnown RBP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 FTSJ1Q9UET6 329 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 SLC17A4Q9Y2C5 497 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 PCYT1BQ9Y5K3 369 aaPredicted RBP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 CORINQ9Y5Q5 1042 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 GPC6Q9Y625 555 aaPredicted RBP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 CFAP20Q9Y6A4 193 aaKnown RBP9.15□□□□□ -0.95
NPHP3-209ENST00000493732 PDE4DIPQ5VU43 2346 aa9.15□□□□□ -0.95
NPHP3-209ENST00000493732 A0A0G2JPF8 293 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 A0A1W2PRQ8 180 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 HNRNPCL2B2RXH8 293 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 HNRNPCL3B7ZW38 293 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 J3KTA2 159 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 UGT2B17O75795 530 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 GASTP01350 101 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 HOXC4P09017 264 aaPredicted RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 HNRNPCL4P0DMR1 293 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 GSTM3P21266 225 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 CHMP24386 653 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 C21orf33P30042 268 aaPredicted RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 CMPK1P30085 196 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 IFNA8P32881 189 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 S100A5P33763 92 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 PPP5CP53041 499 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 MLLT10P55197 1068 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 STXBP1P61764 594 aaKnown RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 NCS1P62166 190 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 LSM3P62310 102 aaKnown RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 PRR5P85299 388 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 KRR1Q13601 381 aaKnown RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 NCF4Q15080 339 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 TMEM201Q5SNT2 666 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 SLX4IPQ5VYV7 408 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 RNLSQ5VYX0 342 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 PLAG1Q6DJT9 500 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 TCTN3Q6NUS6 607 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 KIAA1211LQ6NV74 962 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 CD300LDQ6UXZ3 194 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 Q6ZPB1 254 aaPredicted RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 UBE3DQ7Z6J8 389 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 SAMD14Q8IZD0 417 aaPredicted RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 LINC01555Q8NAE3 123 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 OR2L5Q8NG80 312 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 OR8J1Q8NGP2 316 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 SUN3Q8TAQ9 357 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 ASB12Q8WXK4 309 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 ELSPBP1Q96BH3 223 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 TREX2Q9BQ50 279 aaPredicted RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 RHNO1Q9BSD3 238 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 DPH7Q9BTV6 452 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 SLIRPQ9GZT3 109 aaKnown RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 BTBD1Q9H0C5 482 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 SIAEQ9HAT2 523 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 C3orf14Q9HBI5 128 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 MBNL1Q9NR56 388 aaKnown RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 TM7SF3Q9NS93 570 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 ZCCHC3Q9NUD5 404 aaKnown RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 IMP3Q9NV31 184 aaKnown RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 GPR83Q9NYM4 423 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 DAPK2Q9UIK4 370 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 SCML1Q9UN30 329 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 ENTPD4Q9Y227 616 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 RPL36Q9Y3U8 105 aaKnown RBP9.14□□□□□ -0.95
NPHP3-209ENST00000493732 OR1A2Q9Y585 309 aa9.14□□□□□ -0.95
NPHP3-209ENST00000493732 PNMA8CA0A1B0GUJ8 204 aa9.13□□□□□ -0.95
NPHP3-209ENST00000493732 IRGMA1A4Y4 181 aa9.13□□□□□ -0.95
NPHP3-209ENST00000493732 SNTNA6NMZ2 147 aa9.13□□□□□ -0.95
NPHP3-209ENST00000493732 ANHXE9PGG2 379 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms