RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 CRB3Q9BUF7 120 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 DPH1Q9BZG8 443 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 MYLK2Q9H1R3 596 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 ACTL8Q9H568 366 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 RMND5AQ9H871 391 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 GPN2Q9H9Y4 310 aaPredicted RBP11.68□□□□□ -0.54
SNX17-208ENST00000493711 ACSS1Q9NUB1 689 aaPredicted RBP11.68□□□□□ -0.54
SNX17-208ENST00000493711 FAM120CQ9NX05 1096 aaKnown RBP11.68□□□□□ -0.54
SNX17-208ENST00000493711 SH3BP4Q9P0V3 963 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 C3orf18Q9UK00 162 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 CROTQ9UKG9 612 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 CES1P1Q9UKY3 287 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 ZMIZ1Q9ULJ6 1067 aa11.68□□□□□ -0.54
SNX17-208ENST00000493711 ZFYVE26Q68DK2 2539 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 IGKV3D-11A0A0A0MRZ8 115 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 TEX51A0A1B0GUA7 166 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 IDSB3KWA1 339 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 IFI6P09912 130 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 PORP16435 677 aaPredicted RBP11.67□□□□□ -0.54
SNX17-208ENST00000493711 SPINK2P20155 84 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 PRDX6P30041 224 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 DLSTP36957 453 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 XKP51811 444 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 NME5P56597 212 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 PLIN5Q00G26 463 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 MC1RQ01726 317 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 FOLH1Q04609 750 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 KLF10Q13118 480 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 SSPNQ14714 243 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 NSDHLQ15738 373 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 CEBPEQ15744 281 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 UGT8Q16880 541 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 PGS1Q32NB8 556 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 AGKQ53H12 422 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 C6orf163Q5TEZ5 329 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 FAM91A1Q658Y4 838 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 LCN10Q6JVE6 187 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 PAOXQ6QHF9 649 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 LRRC25Q8N386 305 aaPredicted RBP11.67□□□□□ -0.54
SNX17-208ENST00000493711 KRTCAP2Q8N6L1 136 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 ZNF248Q8NDW4 579 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 SNIP1Q8TAD8 396 aaKnown RBP11.67□□□□□ -0.54
SNX17-208ENST00000493711 GFM2Q969S9 779 aaKnown RBP11.67□□□□□ -0.54
SNX17-208ENST00000493711 CMTM5Q96DZ9 223 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 SLC25A23Q9BV35 468 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 DUSP26Q9BV47 211 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 ALOXE3Q9BYJ1 711 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 VN1R1Q9GZP7 353 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 NMUR2Q9GZQ4 415 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 CCDC86Q9H6F5 360 aaKnown RBP11.67□□□□□ -0.54
SNX17-208ENST00000493711 AKIRIN1Q9H9L7 192 aaPredicted RBP11.67□□□□□ -0.54
SNX17-208ENST00000493711 TCFL5Q9UL49 500 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 PCDHGB4Q9UN71 923 aa11.67□□□□□ -0.54
SNX17-208ENST00000493711 EXO1Q9UQ84 846 aaKnown RBP11.67□□□□□ -0.54
SNX17-208ENST00000493711 PTRH2Q9Y3E5 179 aaKnown RBP11.67□□□□□ -0.54
SNX17-208ENST00000493711 HEATR5BQ9P2D3 2071 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 PRSS51A0A1B0GVH4 220 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 CCDC154A6NI56 674 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 GLOD5A6NK44 160 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 BBIP1A8MTZ0 92 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 MYO1GB0I1T2 1018 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 RNASET2O00584 256 aaKnown RBP11.66□□□□□ -0.54
SNX17-208ENST00000493711 TERTO14746 1132 aaKnown RBP11.66□□□□□ -0.54
SNX17-208ENST00000493711 FGF17O60258 216 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 ALOX12BO75342 701 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 ERAL1O75616 437 aaKnown RBP11.66□□□□□ -0.54
SNX17-208ENST00000493711 KLF7O75840 302 aaPredicted RBP11.66□□□□□ -0.54
SNX17-208ENST00000493711 ATP1B1P05026 303 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 PGRP06401 933 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 SNRPB2P08579 225 aaKnown RBP11.66□□□□□ -0.54
SNX17-208ENST00000493711 C8orf89P0DMQ9 161 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 CPMP14384 443 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 MMP11P24347 488 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 STX5Q13190 355 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 RCAN2Q14206 197 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 ERV3-1Q14264 604 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 MLC1Q15049 377 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 TERF2Q15554 542 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 FAM174BQ3ZCQ3 159 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 COQ5Q5HYK3 327 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 RAB43Q86YS6 212 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 ST13P4Q8IZP2 240 aaPredicted RBP11.66□□□□□ -0.54
SNX17-208ENST00000493711 KDF1Q8NAX2 398 aaPredicted RBP11.66□□□□□ -0.54
SNX17-208ENST00000493711 OR7A2PQ8NGA2 310 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 RP9Q8TA86 221 aaKnown RBP11.66□□□□□ -0.54
SNX17-208ENST00000493711 OR5P2Q8WZ92 322 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 EXOSC8Q96B26 276 aaKnown RBP11.66□□□□□ -0.54
SNX17-208ENST00000493711 ANKRD9Q96BM1 317 aaPredicted RBP11.66□□□□□ -0.54
SNX17-208ENST00000493711 ERP27Q96DN0 273 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 ART5Q96L15 291 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 DGAT2Q96PD7 388 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 TUBB6Q9BUF5 446 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 RBCK1Q9BYM8 510 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 SOX17Q9H6I2 414 aaPredicted RBP11.66□□□□□ -0.54
SNX17-208ENST00000493711 CCDC167Q9P0B6 97 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 ADAMTS20P59510 1910 aa11.66□□□□□ -0.54
SNX17-208ENST00000493711 LOC101059948A0A1B0GTJ6 334 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 A0A1W2PP18 115 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 A0A1W2PRB8 838 aa11.65□□□□□ -0.54
SNX17-208ENST00000493711 TCRBV16S1A1N1A0A5B0 115 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms