RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ZNF683Q8IZ20 524 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 HDDC3Q8N4P3 179 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 GBGT1Q8N5D6 347 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 OR14L1PQ8NHC6 308 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 OR2T6Q8NHC8 308 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 GANCQ8TET4 914 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 SETD7Q8WTS6 366 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 NAT14Q8WUY8 206 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 TAF4BQ92750 862 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 DHTKD1Q96HY7 919 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 GMPPAQ96IJ6 420 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 CELF6Q96J87 481 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 MPP4Q96JB8 637 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 TMEM68Q96MH6 324 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 TIGD1Q96MW7 591 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 GSDMAQ96QA5 445 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 PRMT1Q99873 361 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 SYT11Q9BT88 431 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 GOLPH3Q9H4A6 298 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 FBXO44Q9H4M3 255 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 TM9SF3Q9HD45 589 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 SEPT11Q9NVA2 429 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 RMND1Q9NWS8 449 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 ELOVL2Q9NXB9 296 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 KLHL9Q9P2J3 617 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 CGNQ9P2M7 1197 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 THAP10Q9P2Z0 257 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 RWDD2AQ9UIY3 292 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 NOCTQ9UK39 431 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 ERVW-1Q9UQF0 538 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 EXOGQ9Y2C4 368 aaKnown RBP2.8□□□□□ -1.96
PTCD3-218ENST00000493430 PYGO1Q9Y3Y4 419 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 CELSR3Q9NYQ7 3312 aa2.8□□□□□ -1.96
PTCD3-218ENST00000493430 ITPR1Q14643 2758 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 ZFHX4Q86UP3 3567 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SVILO95425 2214 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 A0A1W2PNU3 283 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SYCE3A1L190 88 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 C15orf62A8K5M9 175 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 H0Y626 953 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 EIF3FO00303 357 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 PLOD2O00469 737 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 KPNA3O00505 521 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SLC9A3R1O14745 358 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SLC31A1O15431 190 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 AP5Z1O43299 807 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SYNCRIPO60506 623 aaKnown RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 RNASEH2AO75792 299 aaKnown RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SEMA4FO95754 770 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 CD160O95971 181 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 CLPTM1O96005 669 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 IL1BP01584 269 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 PAEPP09466 180 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 CYP11B1P15538 503 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 ZNF18P17022 549 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 POLR2EP19388 210 aaKnown RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 PAFAH1B1P43034 410 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 TUBP50607 506 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 DNA2P51530 1060 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 AP3M2P53677 418 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 GALCP54803 685 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SLC8A3P57103 927 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SNRPFP62306 86 aaKnown RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SMARCB1Q12824 385 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 PTP4A2Q12974 167 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 ENPP2Q13822 863 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 IHHQ14623 411 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 CST6Q15828 149 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 TPD52L1Q16890 204 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 EXOC3L4Q17RC7 722 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 HLA-BQ31612 363 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 TCP11X2Q5H9J9 407 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 C9orf64Q5T6V5 341 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 PIP5KL1Q5T9C9 394 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 LCN10Q6JVE6 187 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 GBP6Q6ZN66 633 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 LUZP1Q86V48 1076 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 LRRTM4Q86VH4 590 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 NAXDQ8IW45 347 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SLC22A18ASQ8N1D0 253 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 EID2Q8N6I1 236 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 NPWQ8N729 165 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 HJURPQ8NCD3 748 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 MRGPRDQ8TDS7 321 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 PPP4R1Q8TF05 950 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 RXFP2Q8WXD0 754 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SKA1Q96BD8 255 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 TMA16Q96EY4 203 aaKnown RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 SIPA1Q96FS4 1042 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 MAELQ96JY0 434 aaKnown RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 NAP1L5Q96NT1 182 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 RPRD1AQ96P16 312 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 MCEEQ96PE7 176 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 XPO6Q96QU8 1125 aaKnown RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 NPY6RQ99463 290 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 TUBGCP2Q9BSJ2 902 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 WRAP53Q9BUR4 548 aaKnown RBP2.79□□□□□ -1.96
PTCD3-218ENST00000493430 DNAI2Q9GZS0 605 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 NEUROG2Q9H2A3 272 aa2.79□□□□□ -1.96
PTCD3-218ENST00000493430 TMEM245Q9H330 911 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms