RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CAPN3P20807 821 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 MAOAP21397 527 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 DLSTP36957 453 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 FOLR3P41439 243 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 XKP51811 444 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 DGKQP52824 942 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 WNT3P56703 355 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 PCBP4P57723 403 aaKnown RBP17.48■□□□□ 0.39
MCF2L-230ENST00000491028 BTG2P78543 158 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 CYLC2Q14093 348 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-230ENST00000491028 KRT72Q14CN4 511 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 MLC1Q15049 377 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 PRSS53Q2L4Q9 553 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 MPEG1Q2M385 716 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 CPZQ66K79 652 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 TREML1Q86YW5 311 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 LRRC25Q8N386 305 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-230ENST00000491028 NUDT8Q8WV74 236 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 CMTM5Q96DZ9 223 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 ZNF681Q96N22 645 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 OR52E6Q96RD3 313 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 BBS4Q96RK4 519 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 CRB3Q9BUF7 120 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 RMND5AQ9H871 391 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 SLC52A3Q9NQ40 469 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 NECTIN3Q9NQS3 549 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 C3orf18Q9UK00 162 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 KCND3Q9UK17 655 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 PCDHGA6Q9Y5G7 932 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 CLDN16Q9Y5I7 305 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 SCN2AQ99250 2005 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 CROCCQ5TZA2 2017 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 A0A1W2PRB8 838 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 TCRBV16S1A1N1A0A5B0 115 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 TGFBR3LH3BV60 316 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 KLF7O75840 302 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-230ENST00000491028 IGHEP01854 428 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 SLC35E2P0CK97 266 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 CPMP14384 443 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 MPIP34949 423 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 EMP2P54851 167 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 PHC1P78364 1004 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 PLIN5Q00G26 463 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 STX5Q13190 355 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 COQ5Q5HYK3 327 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 SHISA6Q6ZSJ9 500 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 LAPTM4BQ86VI4 370 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 SNX32Q86XE0 403 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 OR4N5Q8IXE1 308 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 ST13P4Q8IZP2 240 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-230ENST00000491028 IL22RA1Q8N6P7 574 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 METTL21AQ8WXB1 218 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 CIDECQ96AQ7 238 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-230ENST00000491028 KIAA1143Q96AT1 154 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-230ENST00000491028 SEMA3GQ9NS98 782 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 BTNL2Q9UIR0 455 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 LEF1Q9UJU2 399 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-230ENST00000491028 TCFL5Q9UL49 500 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 NDUFAF1Q9Y375 327 aa17.47■□□□□ 0.39
MCF2L-230ENST00000491028 PTRH2Q9Y3E5 179 aaKnown RBP17.47■□□□□ 0.39
MCF2L-230ENST00000491028 DCHS1Q96JQ0 3298 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 LOC101059948A0A1B0GTJ6 334 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 PRSS51A0A1B0GVH4 220 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 ANGPT2O15123 496 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 SCN2BO60939 215 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 ALOX12BO75342 701 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 ATP1B1P05026 303 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 C8orf89P0DMQ9 161 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 COX4I1P13073 169 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 PTPN4P29074 926 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 GALNSP34059 522 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 FEN1P39748 380 aaKnown RBP17.46■□□□□ 0.39
MCF2L-230ENST00000491028 STT3AP46977 705 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 EFNA3P52797 238 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 ID2Q02363 134 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 NSDHLQ15738 373 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 MAPKAPK3Q16644 382 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 VPS26BQ4G0F5 336 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 SUN3Q8TAQ9 357 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 OR5P2Q8WZ92 322 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 TSLPQ969D9 159 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 VPS33AQ96AX1 596 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 CCDC115Q96NT0 180 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 AMDHD1Q96NU7 426 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 EFHD1Q9BUP0 239 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 ALOXE3Q9BYJ1 711 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 GLIPR2Q9H4G4 154 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 NEUROD4Q9HD90 331 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 SLAMF7Q9NQ25 335 aa17.46■□□□□ 0.39
MCF2L-230ENST00000491028 C19orf25Q9UFG5 118 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-230ENST00000491028 OR2W5A6NFC9 320 aa17.45■□□□□ 0.38
MCF2L-230ENST00000491028 CCT8L1PA6NM43 557 aa17.45■□□□□ 0.38
MCF2L-230ENST00000491028 OR10H2O60403 315 aa17.45■□□□□ 0.38
MCF2L-230ENST00000491028 SLITRK5O94991 958 aa17.45■□□□□ 0.38
MCF2L-230ENST00000491028 UMODP07911 640 aa17.45■□□□□ 0.38
MCF2L-230ENST00000491028 IFI6P09912 130 aa17.45■□□□□ 0.38
MCF2L-230ENST00000491028 CD1EP15812 388 aa17.45■□□□□ 0.38
MCF2L-230ENST00000491028 NCBP2P52298 156 aaKnown RBP eCLIP17.45■□□□□ 0.38
MCF2L-230ENST00000491028 MANFP55145 182 aaKnown RBP17.45■□□□□ 0.38
MCF2L-230ENST00000491028 TLR1Q15399 786 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms