RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LYARQ9NX58 379 aaKnown RBP18.23■□□□□ 0.51
SREBF1-216ENST00000490796 ANKRD17O75179 2603 aaKnown RBP18.22■□□□□ 0.51
SREBF1-216ENST00000490796 CCDC189A1A4V9 331 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 PLPP1O14494 284 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 POU3F2P20265 443 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-216ENST00000490796 PIK3CGP48736 1102 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 RPS13P62277 151 aaKnown RBP18.22■□□□□ 0.51
SREBF1-216ENST00000490796 KCNJ2P63252 427 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 IGLV3-21P80748 117 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-216ENST00000490796 SETDB1Q15047 1291 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 ACAP2Q15057 778 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 EMC4Q5J8M3 183 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 WLSQ5T9L3 541 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 C18orf63Q68DL7 685 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 B3GNT6Q6ZMB0 384 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 TRILQ7L0X0 811 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 CDH24Q86UP0 819 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 ST13P4Q8IZP2 240 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-216ENST00000490796 ZCCHC7Q8N3Z6 543 aaKnown RBP18.22■□□□□ 0.51
SREBF1-216ENST00000490796 RPRMLQ8N4K4 120 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 SLC15A4Q8N697 577 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 FAM13CQ8NE31 585 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 SARAFQ96BY9 339 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 FBXL20Q96IG2 436 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 UCK2Q9BZX2 261 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 ALKBH4Q9NXW9 302 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 TUBA8Q9NY65 449 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-216ENST00000490796 BOKQ9UMX3 212 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-216ENST00000490796 ATG4BQ9Y4P1 393 aa18.22■□□□□ 0.51
SREBF1-216ENST00000490796 TNPO3Q9Y5L0 923 aaKnown RBP18.22■□□□□ 0.51
SREBF1-216ENST00000490796 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.22■□□□□ 0.51
SREBF1-216ENST00000490796 IGHG3P01860 377 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 C2P06681 752 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 PHBP35232 272 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 PIGAP37287 484 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 NR0B1P51843 470 aaKnown RBP18.21■□□□□ 0.51
SREBF1-216ENST00000490796 ARFIP1P53367 373 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 ALDH18A1P54886 795 aaKnown RBP18.21■□□□□ 0.51
SREBF1-216ENST00000490796 IRF9Q00978 393 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 GTF2H2Q13888 395 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 ZNF267Q14586 743 aaPredicted RBP18.21■□□□□ 0.51
SREBF1-216ENST00000490796 CPSF6Q16630 551 aaKnown RBP eCLIP18.21■□□□□ 0.51
SREBF1-216ENST00000490796 GTF2H2CQ6P1K8 395 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 RNF111Q6ZNA4 994 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 C9orf40Q8IXQ3 194 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 DND1Q8IYX4 353 aaKnown RBP18.21■□□□□ 0.51
SREBF1-216ENST00000490796 ATP6V1E2Q96A05 226 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 SNX15Q9NRS6 342 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 CPSF2Q9P2I0 782 aaKnown RBP18.21■□□□□ 0.51
SREBF1-216ENST00000490796 LIPGQ9Y5X9 500 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 SPG11Q96JI7 2443 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 CSMD2Q7Z408 3487 aa18.21■□□□□ 0.51
SREBF1-216ENST00000490796 A0A096LPK6 155 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 TRGV5A0A0B4J1U4 118 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 AQP7O14520 342 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 SUSD5O60279 629 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 UGDHO60701 494 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 ZNF354AO60765 605 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-216ENST00000490796 GPR75O95800 540 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 IGKV3-11P04433 115 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 NR2F6P10588 404 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 MTHFD2P13995 350 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 SERPINB3P29508 390 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 TYK2P29597 1187 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 HNRNPH2P55795 449 aaKnown RBP18.2■□□□□ 0.5
SREBF1-216ENST00000490796 KRTAP10-9P60411 292 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 HERVK_113P63132 956 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 ERVK-8P63133 956 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 ZDHHC24Q6UX98 284 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 CENPLQ8N0S6 344 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-216ENST00000490796 CLYBLQ8N0X4 340 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 DOK4Q8TEW6 326 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 RIT1Q92963 219 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 SPACA9Q96E40 222 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-216ENST00000490796 ERVK-6Q9BXR3 956 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 IPPKQ9H8X2 491 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 SLC24A3Q9HC58 644 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 ERVK-19Q9WJR5 959 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 TSC22D4Q9Y3Q8 395 aa18.2■□□□□ 0.5
SREBF1-216ENST00000490796 A0A1B0GVC2 190 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 GLOD5A6NK44 160 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 FAM47E-STBD1D6RA91 191 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 H0YIV9 168 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 PROM1O43490 865 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 HCN1O60741 890 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 WDR1O75083 606 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 PRKRAO75569 313 aaKnown RBP18.19■□□□□ 0.5
SREBF1-216ENST00000490796 TOXO94900 526 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 KLHL2O95198 593 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 FAM58BPP0C7Q3 252 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 SERPINB8P50452 374 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 FOXO1Q12778 655 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 TRADDQ15628 312 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 HYAL4Q2M3T9 481 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 ZNF791Q3KP31 576 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-216ENST00000490796 PRAMEF20Q5VT98 475 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 HLA-DQA1Q5Y7H0 255 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 SYT10Q6XYQ8 523 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 NUDT13Q86X67 352 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 TAGAPQ8N103 731 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms