RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ATOH8Q96SQ7 321 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SEPT5Q99719 369 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SMOQ99835 787 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TMEM246Q9BRR3 403 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CRB3Q9BUF7 120 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TEX101Q9BY14 249 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 GABARAPL3Q9BY60 117 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ULBP1Q9BZM6 244 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 MFSD1Q9H3U5 465 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ACTL8Q9H568 366 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SYNDIG1Q9H7V2 258 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ACTR8Q9H981 624 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SMURF2Q9HAU4 748 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 IL1RL2Q9HB29 575 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 NMUR1Q9HB89 426 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 C3orf14Q9HBI5 128 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 GLOD4Q9HC38 313 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF334Q9HCZ1 680 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 MID1IP1Q9NPA3 183 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CNGB3Q9NQW8 809 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ENTPD7Q9NQZ7 604 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 DCAF13Q9NV06 445 aaKnown RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ADPRHL2Q9NX46 363 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SCN3BQ9NY72 215 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 STMN3Q9NZ72 180 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SEPT10Q9P0V9 454 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 KLHL21Q9UJP4 597 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 FBXW11Q9UKB1 542 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 NUP50Q9UKX7 468 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 AGO1Q9UL18 857 aaKnown RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 EDARQ9UNE0 448 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 RNF6Q9Y252 685 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PRELID1Q9Y255 219 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CFL2Q9Y281 166 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PKP3Q9Y446 797 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 KLK4Q9Y5K2 254 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 MAGED1Q9Y5V3 778 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PTGDR2Q9Y5Y4 395 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 LYVE1Q9Y5Y7 322 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ACTL7AQ9Y615 435 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TMEM131Q92545 1883 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CDH23Q9H251 3354 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 EYSQ5T1H1 3165 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CEP192Q8TEP8 1941 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 MTMR11A4FU01 709 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 CENPXA8MT69 81 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 HIDE1A8MVS5 230 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM72CH0Y354 149 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 PPP6CO00743 305 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 CD3EAPO15446 510 aaKnown RBP3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 CCL16O15467 120 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 TEX28O15482 410 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 XPNPEP2O43895 674 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 AIREO43918 545 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 PCDHGA12O60330 932 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM20BO75063 409 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 PMPCBO75439 489 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 ITGA10O75578 1167 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 GJB3O75712 270 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 RECQL5O94762 991 aaPredicted RBP3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 B3GAT3O94766 335 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 PGLSO95336 258 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 MLYCDO95822 493 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 FADS2O95864 444 aaKnown RBP3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 LGI1O95970 557 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 MOCS2O96007 188 aaPredicted RBP3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 HLA-DQB1P01920 261 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 C1QBP02746 253 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 FTH1P02794 183 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 RPLP0P05388 317 aaKnown RBP3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 LCKP06239 509 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 FYNP06241 537 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 UROSP10746 265 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 EPCAMP16422 314 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF37AP17032 561 aaPredicted RBP3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF30P17039 623 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 CTRB1P17538 263 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 TPH1P17752 444 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 ATF6P18850 670 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 OGNP20774 298 aaKnown RBP3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 FPR1P21462 350 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 PRKACBP22694 351 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 CHMP24386 653 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 GADD45AP24522 165 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 IGFBP5P24593 272 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 CCNCP24863 283 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 HLA-DMAP28067 261 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 HLA-FP30511 346 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 HOXA9P31269 272 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 IFNA8P32881 189 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 S100A5P33763 92 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 LIPAP38571 399 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 PLA2G5P39877 138 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 HNF4AP41235 474 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 OR3A3P47888 321 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 MTNR1BP49286 362 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 CXCR3P49682 368 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 TAF6P49848 677 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 PLK1P53350 603 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC12A2P55011 1212 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms