RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 PAQR8Q8TEZ7 354 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 ZNF473Q8WTR7 871 aaKnown RBP8.63□□□□□ -1.03
SNX17-207ENST00000489402 CMTM7Q96FZ5 175 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 POM121Q96HA1 1249 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 FBXL20Q96IG2 436 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 JSRP1Q96MG2 331 aaPredicted RBP8.63□□□□□ -1.03
SNX17-207ENST00000489402 GAL3ST4Q96RP7 486 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 CPNE1Q99829 537 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 GPATCH1Q9BRR8 931 aaKnown RBP8.63□□□□□ -1.03
SNX17-207ENST00000489402 PELOQ9BRX2 385 aaKnown RBP8.63□□□□□ -1.03
SNX17-207ENST00000489402 MCMBPQ9BTE3 642 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 CNPPD1Q9BV87 410 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 TMUB1Q9BVT8 246 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 CD244Q9BZW8 370 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 CXXC4Q9H2H0 198 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 CLEC4MQ9H2X3 399 aaPredicted RBP8.63□□□□□ -1.03
SNX17-207ENST00000489402 RPF2Q9H7B2 306 aaKnown RBP8.63□□□□□ -1.03
SNX17-207ENST00000489402 CAB39LQ9H9S4 337 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 ZFP64Q9NPA5 681 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 CCM2LQ9NUG4 571 aaPredicted RBP8.63□□□□□ -1.03
SNX17-207ENST00000489402 CNIH4Q9P003 139 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 SPRR3Q9UBC9 169 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 ADGRE2Q9UHX3 823 aa8.63□□□□□ -1.03
SNX17-207ENST00000489402 PTBP2Q9UKA9 531 aaKnown RBP8.63□□□□□ -1.03
SNX17-207ENST00000489402 DNHD1Q96M86 4753 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 ITPR3Q14573 2671 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 C15orf38-AP3S2A0A0A6YYH1 394 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 SUPT3HB4E1H0 165 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 CCDC188H7C350 402 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 SAP18O00422 153 aaKnown RBP8.62□□□□□ -1.03
SNX17-207ENST00000489402 DVL2O14641 736 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 OR10H2O60403 315 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 SUPT3HO75486 399 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 IGKV3-11P04433 115 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 ALOX15P16050 662 aaPredicted RBP8.62□□□□□ -1.03
SNX17-207ENST00000489402 ENDOUP21128 410 aaKnown RBP8.62□□□□□ -1.03
SNX17-207ENST00000489402 DNASE1P24855 282 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 GDF1P27539 372 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 GP5P40197 560 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 BUD31P41223 144 aaPredicted RBP8.62□□□□□ -1.03
SNX17-207ENST00000489402 CASP2P42575 452 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 ASCL1P50553 236 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 HERVK_113P63132 956 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 ERVK-8P63133 956 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 PHEXP78562 749 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 TNFRSF17Q02223 184 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 SLAMF1Q13291 335 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 DDX39BQ13838 428 aaKnown RBP8.62□□□□□ -1.03
SNX17-207ENST00000489402 SF3B4Q15427 424 aaKnown RBP eCLIP8.62□□□□□ -1.03
SNX17-207ENST00000489402 CEBPEQ15744 281 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 FBXW10Q5XX13 1052 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 OR4C11Q6IEV9 310 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 RNF111Q6ZNA4 994 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 DGAT2L6Q6ZPD8 337 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 GPR180Q86V85 440 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 LAS2Q8IYD9 372 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 ULK2Q8IYT8 1036 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 RNF175Q8N4F7 328 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 OR7G3Q8NG95 312 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 NEIL3Q8TAT5 605 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 STAG3L4Q8TBR4 150 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 PYROXD1Q8WU10 500 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 TANKQ92844 425 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 RGMAQ96B86 450 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 ZNF597Q96LX8 424 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 GPR22Q99680 433 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 RBBP8Q99708 897 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 DOHHQ9BU89 302 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 ERVK-6Q9BXR3 956 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 SLC6A15Q9H2J7 730 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 ACKR4Q9NPB9 350 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 RASSF1Q9NS23 344 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 TRMT1Q9NXH9 659 aaKnown RBP8.62□□□□□ -1.03
SNX17-207ENST00000489402 NUDT4Q9NZJ9 180 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 OPTCQ9UBM4 332 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 MTRF1LQ9UGC7 380 aaKnown RBP8.62□□□□□ -1.03
SNX17-207ENST00000489402 ST6GALNAC2Q9UJ37 374 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 ERVK-19Q9WJR5 959 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 BOLA1Q9Y3E2 137 aa8.62□□□□□ -1.03
SNX17-207ENST00000489402 LRRC3CA6NJW4 275 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 OR6C76A6NM76 312 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 WASHC1A8K0Z3 465 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 CAPN14A8MX76 684 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 CXorf49A8MYA2 514 aaPredicted RBP8.61□□□□□ -1.03
SNX17-207ENST00000489402 AHRRA9YTQ3 701 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 KDM4EB2RXH2 506 aaPredicted RBP8.61□□□□□ -1.03
SNX17-207ENST00000489402 K7EPI3 171 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 HRKO00198 91 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 SYT5O00445 386 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 TP53I11O14683 189 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 FBXO45P0C2W1 286 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 RFPL3SP0C7P2 107 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 EPB42P16452 691 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 EPORP19235 508 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 KLK2P20151 261 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 BMP5P22003 454 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 SSTR1P30872 391 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 SPRP35270 261 aaPredicted RBP8.61□□□□□ -1.03
SNX17-207ENST00000489402 PAFAH1B1P43034 410 aa8.61□□□□□ -1.03
SNX17-207ENST00000489402 RPL21P46778 160 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms