RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 GTF3C3Q9Y5Q9 886 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 KMT2CQ8NEZ4 4911 aaKnown RBP10.42□□□□□ -0.74
HDAC6-233ENST00000489352 PRR14LQ5THK1 2151 aa10.42□□□□□ -0.74
HDAC6-233ENST00000489352 A0A087X0T9 212 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 SLC22A20A6NK97 555 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 H3BMM5 538 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 TRIM77I1YAP6 450 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 PLOD2O00469 737 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 GNB5O14775 395 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 PFDN6O15212 129 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 PSMD3O43242 534 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 TGM6O95932 706 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 FAM228BP0C875 321 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 CD8BP10966 210 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 APEHP13798 732 aaKnown RBP10.41□□□□□ -0.74
HDAC6-233ENST00000489352 COX7A2P14406 83 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 IMPA1P29218 277 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 FMO4P31512 558 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 RPP38P78345 283 aaKnown RBP10.41□□□□□ -0.74
HDAC6-233ENST00000489352 KCNJ11Q14654 390 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 ACSBG2Q5FVE4 666 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 TSTD2Q5T7W7 516 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 ZNF534Q76KX8 674 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 TRIM42Q8IWZ5 723 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 REXO1L1PQ8IX06 675 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 LRRC56Q8IYG6 542 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-233ENST00000489352 ZNF525Q8N782 197 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 FAM47BQ8NA70 645 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 OR1J4Q8NGS1 313 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 LILRB1Q8NHL6 650 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-233ENST00000489352 C3orf49Q96BT1 292 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 RHBDF1Q96CC6 855 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 TRAF4Q9BUZ4 470 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-233ENST00000489352 BHLHE41Q9C0J9 482 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-233ENST00000489352 FETUBQ9UGM5 382 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 AMFRQ9UKV5 643 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 B3GALT5Q9Y2C3 310 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 PCDHGB1Q9Y5G3 927 aa10.41□□□□□ -0.74
HDAC6-233ENST00000489352 TRBC2A0A5B9 178 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 LRRC10BA6NIK2 292 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 EIF3FO00303 357 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-233ENST00000489352 EMC8O43402 210 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 CSF3P09919 207 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 FBXO45P0C2W1 286 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 RPS3P23396 243 aaKnown RBP eCLIP10.4□□□□□ -0.74
HDAC6-233ENST00000489352 CCND1P24385 295 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 KIR2DL2P43627 348 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-233ENST00000489352 RAB38P57729 211 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 GPS1Q13098 491 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 SCGB2A2Q13296 93 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 RCN2Q14257 317 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 PARP6Q2NL67 630 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 TTLL9Q3SXZ7 439 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 AGAP6Q5VW22 663 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 AAGABQ6PD74 315 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 TAGAPQ8N103 731 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 TRPV3Q8NET8 790 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 ZNF418Q8TF45 676 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-233ENST00000489352 FAM216AQ8WUB2 273 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 PYCR2Q96C36 320 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 GAL3ST4Q96RP7 486 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 NPLQ9BXD5 320 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-233ENST00000489352 GRIP2Q9C0E4 1043 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 ACTR6Q9GZN1 396 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 RYDENQ9NUL5 291 aaKnown RBP10.4□□□□□ -0.74
HDAC6-233ENST00000489352 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.4□□□□□ -0.74
HDAC6-233ENST00000489352 TEX10Q9NXF1 929 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-233ENST00000489352 ZFP69BQ9UJL9 534 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 RNF112Q9ULX5 631 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 SH2B3Q9UQQ2 575 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 DLGAP4Q9Y2H0 992 aa10.4□□□□□ -0.74
HDAC6-233ENST00000489352 A0A088AWK7 358 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 LINC01387J3KSC0 135 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 APOC4-APOC2K7ER74 178 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 SPOPO43791 374 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 CTNSO60931 367 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 NIPSNAP2O75323 286 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 APOC2P02655 101 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 ALDOAP04075 364 aaKnown RBP10.39□□□□□ -0.75
HDAC6-233ENST00000489352 SERPING1P05155 500 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 ZNF10P21506 573 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-233ENST00000489352 ADRA1DP25100 572 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 CDH17Q12864 832 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 SERTAD2Q14140 314 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 GBX1Q14549 363 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 EFTUD2Q15029 972 aaKnown RBP eCLIP10.39□□□□□ -0.754e-8■■■■□ 25.4
HDAC6-233ENST00000489352 NTRK2Q16620 822 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 CYP1B1Q16678 543 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 PGGHGQ32M88 737 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 AWAT1Q58HT5 328 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 TOR1AIP1Q5JTV8 583 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 BICRALQ6AI39 1079 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 SBSNQ6UWP8 590 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 SLC29A4Q7RTT9 530 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 STRA8Q7Z7C7 330 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 SDCCAG8Q86SQ7 713 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-233ENST00000489352 IFNEQ86WN2 208 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 SNX31Q8N9S9 440 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 SEMA6DQ8NFY4 1073 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 C10orf105Q8TEF2 133 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms