RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 RAB7BQ96AH8 199 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 ZNF501Q96CX3 271 aaPredicted RBP3.7□□□□□ -1.82
XRN1-213ENST00000489241 WBP1Q96G27 269 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 DEFB118Q96PH6 123 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 RAB40CQ96S21 281 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 NACA2Q9H009 215 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 GDF3Q9NR23 364 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 ERVK-18Q9QC07 812 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 LHX3Q9UBR4 397 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 GAB2Q9UQC2 676 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 WDR37Q9Y2I8 494 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 KLHDC2Q9Y2U9 406 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 ANGPTL3Q9Y5C1 460 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 PTPRUQ92729 1446 aa3.7□□□□□ -1.82
XRN1-213ENST00000489241 A0A087WW49 117 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 A0A0U1RQV5 110 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 TCP10L2B9ZVM9 353 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 HHLA1C9JL84 531 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 ARPC1BO15143 372 aaKnown RBP3.69□□□□□ -1.82
XRN1-213ENST00000489241 SURF4O15260 269 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 TLX2O43763 284 aaPredicted RBP3.69□□□□□ -1.82
XRN1-213ENST00000489241 CSO75390 466 aaKnown RBP3.69□□□□□ -1.82
XRN1-213ENST00000489241 VPS26AO75436 327 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 CSDE1O75534 798 aaKnown RBP3.69□□□□□ -1.82
XRN1-213ENST00000489241 HMBSP08397 361 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 KRT13P13646 458 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 GIFP27352 417 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 NPY2RP49146 381 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 ARFIP1P53367 373 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 PAX9P55771 341 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 HSF2Q03933 536 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 BTG3Q14201 252 aaPredicted RBP3.69□□□□□ -1.82
XRN1-213ENST00000489241 MTF1Q14872 753 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 CLPPQ16740 277 aaPredicted RBP3.69□□□□□ -1.82
XRN1-213ENST00000489241 ZSWIM7Q19AV6 140 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 Q71RC1 249 aaPredicted RBP3.69□□□□□ -1.82
XRN1-213ENST00000489241 HOGA1Q86XE5 327 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 KLHDC8BQ8IXV7 354 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 BANPQ8N9N5 519 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 OR5T2Q8NGG2 359 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 GOLGA5Q8TBA6 731 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 MAPK15Q8TD08 544 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 CHPT1Q8WUD6 406 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 TMEM190Q8WZ59 177 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 VAT1LQ9HCJ6 419 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 CENPMQ9NSP4 180 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 AATFQ9NY61 560 aaKnown RBP eCLIP3.69□□□□□ -1.82
XRN1-213ENST00000489241 LAMP5Q9UJQ1 280 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 MFHAS1Q9Y4C4 1052 aa3.69□□□□□ -1.82
XRN1-213ENST00000489241 ATAD2BQ9ULI0 1458 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 FAM230AA0A1W2PPH8 454 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 C15orf61A6NNL5 157 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 A8MU76 341 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 NPIPB9F8W1W9 429 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 SLCO1B7G3V0H7 640 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 KIAA0513O60268 411 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 TOM1L1O75674 476 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 PATE4P0C8F1 98 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 RRASP10301 218 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 MYOGP15173 224 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 CYP11B1P15538 503 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 EDNRAP25101 427 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 TMOD1P28289 359 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 SOX6P35712 828 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 OVGP1Q12889 678 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 NME3Q13232 169 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 RIGQ13278 110 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 HNRNPDQ14103 355 aaKnown RBP3.68□□□□□ -1.82
XRN1-213ENST00000489241 P2RY14Q15391 338 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 RFTN2Q52LD8 501 aaPredicted RBP3.68□□□□□ -1.82
XRN1-213ENST00000489241 DCAF12Q5T6F0 453 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 Q6ZRG5 221 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 MISPQ8IVT2 679 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 OR4N5Q8IXE1 308 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 RELL2Q8NC24 303 aaPredicted RBP3.68□□□□□ -1.82
XRN1-213ENST00000489241 DENND6BQ8NEG7 585 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 OR5M9Q8NGP3 310 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 RPLP0P6Q8NHW5 317 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 LIPHQ8WWY8 451 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 TMEM37Q8WXS4 190 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 MCHR2Q969V1 340 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 MRPL24Q96A35 216 aaKnown RBP3.68□□□□□ -1.82
XRN1-213ENST00000489241 CCDC51Q96ER9 411 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 COG3Q96JB2 828 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 ACCSQ96QU6 501 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 MYCBPQ99417 103 aaPredicted RBP3.68□□□□□ -1.82
XRN1-213ENST00000489241 ERP44Q9BS26 406 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 CRACR2AQ9BSW2 395 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 FICDQ9BVA6 458 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 ZNF416Q9BWM5 594 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 BARHL1Q9BZE3 327 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 HOXD1Q9GZZ0 328 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 RIBC2Q9H4K1 309 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 PALMDQ9NP74 551 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 C2orf42Q9NWW7 574 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 MIOXQ9UGB7 285 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 KIF3AQ9Y496 699 aa3.68□□□□□ -1.82
XRN1-213ENST00000489241 SMCHD1A6NHR9 2005 aa3.67□□□□□ -1.82
XRN1-213ENST00000489241 A0A1B0GUL7 405 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms