RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 RPS26P62854 115 aaKnown RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 DUSP2Q05923 314 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 TOP3AQ13472 1001 aaPredicted RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 SIM2Q14190 667 aaPredicted RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 PUM1Q14671 1186 aaKnown RBP eCLIP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 LAPTM4AQ15012 233 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 DUSP7Q16829 419 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 PUS10Q3MIT2 529 aaKnown RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 RBM48Q5RL73 367 aaKnown RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 C6orf141Q5SZD1 244 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 ZNF691Q5VV52 312 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 FRMPD2BQ6IN97 320 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 LAIR2Q6ISS4 152 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 TNFAIP8L2Q6P589 184 aaPredicted RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 RBM44Q6ZP01 1051 aaKnown RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 RNF44Q7L0R7 432 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 DGLUCYQ7Z3D6 616 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 IQCHQ86VS3 1027 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 PARGQ86W56 976 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 GJD3Q8N144 294 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 FAM46DQ8NEK8 389 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 OR56A1Q8NGH5 318 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 OR10G6Q8NH81 332 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 SPPL2AQ8TCT8 520 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 ZDHHC1Q8WTX9 485 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 GEMIN6Q8WXD5 167 aaKnown RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 KLHL6Q8WZ60 621 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 NCSTNQ92542 709 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 HDAC2Q92769 488 aaKnown RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 CLDN23Q96B33 292 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 TMIGD2Q96BF3 282 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 MOAP1Q96BY2 351 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 ELP4Q96EB1 424 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 TMEM19Q96HH6 336 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 ZNF300Q96RE9 604 aaPredicted RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 CDX2Q99626 313 aaPredicted RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 PIP5K1AQ99755 562 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 ZFYVE21Q9BQ24 234 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 TPSD1Q9BZJ3 242 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 GRIP2Q9C0E4 1043 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 YIPF3Q9GZM5 350 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 OR51I1Q9H343 314 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 RUBCNLQ9H714 662 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 LYRM4Q9HD34 91 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 BCL2L10Q9HD36 194 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 SEMA3GQ9NS98 782 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 ACER3Q9NUN7 267 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 EVA1BQ9NVM1 165 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 DDX18Q9NVP1 670 aaKnown RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 NTMQ9P121 344 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 PSME2Q9UL46 239 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 NDRG4Q9ULP0 352 aaKnown RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 COLQQ9Y215 455 aaPredicted RBP6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 PCDHGA8Q9Y5G5 932 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 LYVE1Q9Y5Y7 322 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 CEPT1Q9Y6K0 416 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 ZNF780BQ9Y6R6 833 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 ENPP4Q9Y6X5 453 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 HSPE1-MOB4S4R3N1 261 aa6.36□□□□□ -1.39
RN7SL561P-201ENST00000488553 PCM1Q15154 2024 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 A0A1W2PS29 197 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 TLR4O00206 839 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 TNFRSF11BO00300 401 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 ADAMDEC1O15204 470 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 ZSCAN9O15535 394 aaPredicted RBP6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 EMC8O43402 210 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 B3GALT2O43825 422 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 SH3BP5O60239 455 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 PDE9AO76083 593 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 HMGN2P05204 90 aaKnown RBP6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 BCHEP06276 602 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 FHP07954 510 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 C8orf89P0DMQ9 161 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 OR12D1P0DN82 309 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 NR2F6P10588 404 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 PVRP15151 417 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 IL9P15248 144 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 NME1P15531 152 aaKnown RBP6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 JUNBP17275 347 aaPredicted RBP6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 ALOX12P18054 663 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 RHCEP18577 417 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 CPN2P22792 545 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 CRHBPP24387 322 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 ELK4P28324 431 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 CD38P28907 300 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 RRM2P31350 389 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 GPC1P35052 558 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 FEN1P39748 380 aaKnown RBP6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 LIMS1P48059 325 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 PXNP49023 591 aaPredicted RBP6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 MAN2A2P49641 1150 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 CLK3P49761 638 aaKnown RBP6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 RGS19P49795 217 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 LIM2P55344 173 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 RACK1P63244 317 aaKnown RBP6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 TNFRSF17Q02223 184 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 KCNC4Q03721 635 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 CD47Q08722 323 aa6.35□□□□□ -1.39
RN7SL561P-201ENST00000488553 CDK5R2Q13319 367 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms