RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 BIKQ13323 160 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 PCLAFQ15004 111 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 ST13P4Q8IZP2 240 aaPredicted RBP13.2□□□□□ -0.3
COL9A2-208ENST00000488463 MMP21Q8N119 569 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 FAM26EQ8N5C1 309 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 BCORP1Q8N888 145 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 METTL6Q8TCB7 284 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 NR4A3Q92570 626 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 TM4SF18Q96CE8 201 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 SENP5Q96HI0 755 aaPredicted RBP13.2□□□□□ -0.3
COL9A2-208ENST00000488463 ROPN1BQ9BZX4 212 aaPredicted RBP13.2□□□□□ -0.3
COL9A2-208ENST00000488463 LIN28AQ9H9Z2 209 aaKnown RBP13.2□□□□□ -0.3
COL9A2-208ENST00000488463 ROPN1Q9HAT0 212 aaPredicted RBP13.2□□□□□ -0.3
COL9A2-208ENST00000488463 LRFN1Q9P244 771 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 ABI3Q9P2A4 366 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 TIMM22Q9Y584 194 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 CROCCQ5TZA2 2017 aa13.2□□□□□ -0.3
COL9A2-208ENST00000488463 NME2P1O60361 137 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 SEMA7AO75326 666 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 ITGA10O75578 1167 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 KRT6AP02538 564 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 CLPSP04118 112 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 KRT6BP04259 564 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 SP1P08047 785 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 RNF224P0DH78 156 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 CPA3P15088 417 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 ALOX15P16050 662 aaPredicted RBP13.19□□□□□ -0.3
COL9A2-208ENST00000488463 CREB1P16220 341 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 NME2P22392 152 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 TLX1P31314 330 aaPredicted RBP13.19□□□□□ -0.3
COL9A2-208ENST00000488463 GALNSP34059 522 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 SOX18P35713 384 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 KRT6CP48668 564 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 HK2P52789 917 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 CSTF3Q12996 717 aaKnown RBP13.19□□□□□ -0.3
COL9A2-208ENST00000488463 SPRED3Q2MJR0 410 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 NDUFAF5Q5TEU4 345 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 FAM180AQ6UWF9 173 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 HSDL2Q6YN16 418 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 PAGE2Q7Z2X7 111 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 C10orf107Q8IVU9 208 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 C1orf52Q8N6N3 182 aaKnown RBP13.19□□□□□ -0.3
COL9A2-208ENST00000488463 CCNYL1Q8N7R7 359 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 C7orf57Q8NEG2 295 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 OR8K3Q8NH51 312 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 FBXL20Q96IG2 436 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 APOPT1Q96IL0 206 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 OR8D2Q9GZM6 311 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 PRM3Q9NNZ6 103 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 KLHL1Q9NR64 748 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 OLAHQ9NV23 265 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 ARGLU1Q9NWB6 273 aaPredicted RBP13.19□□□□□ -0.3
COL9A2-208ENST00000488463 AHSPQ9NZD4 102 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 MYOTQ9UBF9 498 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 VPS29Q9UBQ0 182 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 STK38LQ9Y2H1 464 aa13.19□□□□□ -0.3
COL9A2-208ENST00000488463 GTF3C1Q12789 2109 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 ULK1O75385 1050 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 SLC25A12O75746 678 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 OR2J2O76002 312 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 RASAL1O95294 804 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 SLC35E2P0CK97 266 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 CYB561P49447 251 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 RNF4P78317 190 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 PLIN5Q00G26 463 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 RNFT1Q5M7Z0 435 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 CCNYL2Q5T2Q4 361 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 OR52E8Q6IFG1 317 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 SLC25A25Q6KCM7 469 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 GALNT18Q6P9A2 607 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 GALNTL5Q7Z4T8 443 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 MDGA2Q7Z553 956 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 SIAH3Q8IW03 269 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 C9orf40Q8IXQ3 194 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 GBP7Q8N8V2 638 aaPredicted RBP13.18□□□□□ -0.3
COL9A2-208ENST00000488463 DNAJB8Q8NHS0 232 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 SUN3Q8TAQ9 357 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 DOK4Q8TEW6 326 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 APIPQ96GX9 242 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 FRMD6Q96NE9 622 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 DGAT2Q96PD7 388 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 GATA5Q9BWX5 397 aaPredicted RBP13.18□□□□□ -0.3
COL9A2-208ENST00000488463 MID1IP1Q9NPA3 183 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 SIRT5Q9NXA8 310 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 SLC17A7Q9P2U7 560 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 YARS2Q9Y2Z4 477 aaKnown RBP13.18□□□□□ -0.3
COL9A2-208ENST00000488463 CCL27Q9Y4X3 112 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 PCDHA9Q9Y5H5 950 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 ZNF407Q9C0G0 2248 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 TEX15Q9BXT5 2789 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 MYO7BQ6PIF6 2116 aa13.18□□□□□ -0.3
COL9A2-208ENST00000488463 ARHGAP10A1A4S6 786 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 WIPF3A6NGB9 483 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 FCHO1O14526 889 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 TYROBPO43914 113 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 OR6B1O95007 311 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 CD46P15529 392 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 TNNI3P19429 210 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 S1PR1P21453 382 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 HMOX2P30519 316 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms