RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TMCO6Q96DC7 493 aa13.05□□□□□ -0.32
COPS7B-221ENST00000488111 C12orf66Q96MD2 445 aa13.05□□□□□ -0.32
COPS7B-221ENST00000488111 CDK15Q96Q40 435 aa13.05□□□□□ -0.32
COPS7B-221ENST00000488111 CD244Q9BZW8 370 aa13.05□□□□□ -0.32
COPS7B-221ENST00000488111 PCED1AQ9H1Q7 454 aa13.05□□□□□ -0.32
COPS7B-221ENST00000488111 IMP3Q9NV31 184 aaKnown RBP13.05□□□□□ -0.32
COPS7B-221ENST00000488111 TBC1D29Q9UFV1 150 aa13.05□□□□□ -0.32
COPS7B-221ENST00000488111 ACSL5Q9ULC5 683 aa13.05□□□□□ -0.32
COPS7B-221ENST00000488111 BTBD3Q9Y2F9 522 aa13.05□□□□□ -0.32
COPS7B-221ENST00000488111 A0A0G2JMP0 313 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 E9PQ18 207 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 ARHGAP33O14559 1287 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 GPR37L1O60883 481 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 CREG1O75629 220 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 UGT2B17O75795 530 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 SLC16A8O95907 504 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 TNFP01375 233 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 CELA2BP08218 269 aaPredicted RBP13.04□□□□□ -0.32
COPS7B-221ENST00000488111 G6PDP11413 515 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 ITPKAP23677 461 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 HOXA6P31267 233 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 GRK5P34947 590 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 PIK3CBP42338 1070 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 CSNK1EP49674 416 aaKnown RBP13.04□□□□□ -0.32
COPS7B-221ENST00000488111 UGT2B15P54855 530 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 GPLD1P80108 840 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 PCBP2Q15366 365 aaKnown RBP eCLIP13.04□□□□□ -0.321e-14■■■■□ 21.8
COPS7B-221ENST00000488111 RBBP7Q16576 425 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 PROX2Q3B8N5 592 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 PTCHD3Q3KNS1 767 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 SPANXN2Q5MJ10 180 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 LYPD8Q6UX82 237 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 NOXA1Q86UR1 476 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 RAB43Q86YS6 212 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 FAM20CQ8IXL6 584 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 CADM2Q8N3J6 435 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 C2orf73Q8N5S3 287 aaPredicted RBP13.04□□□□□ -0.32
COPS7B-221ENST00000488111 TTC29Q8NA56 475 aaPredicted RBP13.04□□□□□ -0.32
COPS7B-221ENST00000488111 OR52B6Q8NGF0 335 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 NUDT8Q8WV74 236 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 IL17FQ96PD4 163 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 PHOX2BQ99453 314 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 PITX2Q99697 317 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 RPRD1BQ9NQG5 326 aaKnown RBP13.04□□□□□ -0.32
COPS7B-221ENST00000488111 STMN3Q9NZ72 180 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 PCDHGB2Q9Y5G2 931 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 WDFY4Q6ZS81 3184 aa13.04□□□□□ -0.32
COPS7B-221ENST00000488111 PRR19A6NJB7 356 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 STK16O75716 305 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 PRKACBP22694 351 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 RPS5P46782 204 aaKnown RBP13.03□□□□□ -0.32
COPS7B-221ENST00000488111 DHPSP49366 369 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-221ENST00000488111 AP1S2P56377 157 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 TSTA3Q13630 321 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-221ENST00000488111 GTF2H2Q13888 395 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 TIGD6Q17RP2 521 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 GTF2H2CQ6P1K8 395 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 CEP68Q76N32 757 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 GOLGA7Q7Z5G4 137 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 WDR5BQ86VZ2 330 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 CCDC71Q8IV32 467 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-221ENST00000488111 MSRB3Q8IXL7 192 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 DTWD2Q8NBA8 298 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 C1orf216Q8TAB5 229 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 APH1BQ8WW43 257 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 GTF2H4Q92759 462 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 FERD3LQ96RJ6 166 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 THUMPD3Q9BV44 507 aaKnown RBP13.03□□□□□ -0.32
COPS7B-221ENST00000488111 DUSP15Q9H1R2 295 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-221ENST00000488111 GPR27Q9NS67 375 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 GIMAP4Q9NUV9 329 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 STOX2Q9P2F5 926 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-221ENST00000488111 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-221ENST00000488111 AP3M1Q9Y2T2 418 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 TNPO3Q9Y5L0 923 aaKnown RBP13.03□□□□□ -0.32
COPS7B-221ENST00000488111 EML5Q05BV3 1969 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 KNL1Q8NG31 2342 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 CCDC163A0A0D9SF12 145 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 TLR4O00206 839 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 SERPINA1P01009 418 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 RFX2P48378 723 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 PRIM2P49643 509 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 CSNK2BP67870 215 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 PLIN5Q00G26 463 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 NAE1Q13564 534 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 AGTRAPQ6RW13 159 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 GPRIN3Q6ZVF9 776 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 NRROSQ86YC3 692 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 CCDC28AQ8IWP9 274 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 SLC13A3Q8WWT9 602 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 MED8Q96G25 268 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 PYURFQ96I23 114 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 NEDD4LQ96PU5 975 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 GON7Q9BXV9 100 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 RUBCNLQ9H714 662 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 C14orf119Q9NWQ9 140 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 SLC22A14Q9Y267 594 aa13.03□□□□□ -0.32
COPS7B-221ENST00000488111 A0A0X1KG70 313 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 FAM220BPB1ANY3 271 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 HRO43593 1189 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms