RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 RCOR2Q8IZ40 523 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 CLYBLQ8N0X4 340 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 SLC35F6Q8N357 371 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 PRSS35Q8N3Z0 413 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF614Q8N883 585 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC197Q8NCU1 140 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 DQX1Q8TE96 717 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 GATAD1Q8WUU5 269 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 DYDC1Q8WWB3 177 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNRF4Q8WWF5 429 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 LRRC45Q96CN5 670 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 IFT74Q96LB3 600 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP6V0BQ99437 205 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 CDCA3Q99618 268 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 HNRNPABQ99729 332 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 OPRPNQ99935 248 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 RHOXF2Q9BQY4 288 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 HAUS4Q9H6D7 363 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 SPHK2Q9NRA0 654 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 SAMSN1Q9NSI8 373 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 DNAJC17Q9NVM6 304 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 BARHL2Q9NY43 387 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 SEPT10Q9P0V9 454 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 BAIAP2L1Q9UHR4 511 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 FBXL5Q9UKA1 691 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 RUVBL2Q9Y230 463 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 L3MBTL1Q9Y468 752 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 FADS3Q9Y5Q0 445 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 SAR1BQ9Y6B6 198 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 AFF2P51816 1311 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 RIMS2Q9UQ26 1411 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP10BO94823 1461 aa3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 NUP153P49790 1475 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-217ENST00000488087 PREX2Q70Z35 1606 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 PREX1Q8TCU6 1659 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 IGLV7-46A0A075B6I9 117 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 TRBV4-1A0A0J9YWV2 114 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 A0A1B0GVG6 124 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 A0A1W2PR80 420 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 C15orf61A6NNL5 157 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 NPIPA3F8WFD2 350 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 PFDN1O60925 122 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 CRCPO75575 148 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 BBOX1O75936 387 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP5HO75947 161 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 VTNP04004 478 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 PABPC4LP0CB38 370 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 PCP11498 1178 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 P4HA1P13674 534 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 F3P13726 295 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 CCNB1P14635 433 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 LBPP18428 481 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 POLR2EP19388 210 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 ITIH1P19827 911 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 CMA1P23946 247 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 ELAVL4P26378 380 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 PSMB4P28070 264 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 CCND3P30281 292 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 HSPA9P38646 679 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 TSFMP43897 325 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 OR3A3P47888 321 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 SLC12A3P55017 1021 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 XGP55808 180 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 RPL26P61254 145 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 GUCY2DQ02846 1103 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 BNIP1Q12981 228 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 CDH18Q13634 790 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 EFTUD2Q15029 972 aaKnown RBP eCLIP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 NECTIN1Q15223 517 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC152Q4G0S7 254 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 FGD3Q5JSP0 725 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 SUSD4Q5VX71 490 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 FAM166AQ6J272 317 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 CROCCP2Q86T23 111 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 ANKRD46Q86W74 232 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 MEX3DQ86XN8 651 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 APCDD1Q8J025 514 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 FAM89BQ8N5H3 189 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 UXS1Q8NBZ7 420 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 CKAP2Q8WWK9 683 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 RBM18Q96H35 190 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 PDLIM5Q96HC4 596 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC43Q96MW1 224 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 OLFM3Q96PB7 478 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 ZIM3Q96PE6 472 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 USP28Q96RU2 1077 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 ATG101Q9BSB4 218 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 ACAT2Q9BWD1 397 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 SPATA16Q9BXB7 569 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 NACAP1Q9BZK3 213 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 KRT23Q9C075 422 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 RAB17Q9H0T7 212 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 UBQLN3Q9H347 655 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 RNPEPL1Q9HAU8 725 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 TMBIM4Q9HC24 238 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 RAVER2Q9HCJ3 691 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 RAB9BQ9NP90 201 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 GDF3Q9NR23 364 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 PHPT1Q9NRX4 125 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms