RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PLCL2Q9UPR0 1127 aa8.9□□□□□ -0.99
SF3B1-211ENST00000487698 FITM1A5D6W6 292 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 TMEM229AB2RXF0 380 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 H0YJX3 145 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 UPK1AO00322 258 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 LDLRP01130 860 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 C8orf89P0DMQ9 161 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 MYF5P13349 255 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 PNLIPP16233 465 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 CD1CP29017 333 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 TLX1P31314 330 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 MPIP34949 423 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 FEN1P39748 380 aaKnown RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 MAGEA8P43361 318 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 PCBP3P57721 371 aaKnown RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 DSTNP60981 165 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 RPS26P62854 115 aaKnown RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SIM1P81133 766 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SCARB2Q14108 478 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SPIDRQ14159 915 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 INAVAQ3KP66 663 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SPDYE7PQ495Y7 208 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 INTS11Q5TA45 600 aaKnown RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 CEP68Q76N32 757 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 EIF3MQ7L2H7 374 aaKnown RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SPRED1Q7Z699 444 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 RABEPKQ7Z6M1 372 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 PLXDC1Q8IUK5 500 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 CCDC116Q8IYX3 515 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SAMD14Q8IZD0 417 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 OR5T3Q8NGG3 340 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 CCDC74AQ96AQ1 378 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 TBC1D20Q96BZ9 403 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 AHCYL2Q96HN2 611 aaKnown RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 PYURFQ96I23 114 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 BTBD9Q96Q07 612 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 CIB1Q99828 191 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 YY1AP1Q9H869 796 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 NTN4Q9HB63 628 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 ANKHQ9HCJ1 492 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 PDE7BQ9NP56 450 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 A4GALTQ9NPC4 353 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SEMA3GQ9NS98 782 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SOHLH2Q9NX45 425 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF639Q9UID6 485 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 RPS6KA6Q9UK32 745 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 LRCH1Q9Y2L9 728 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF780BQ9Y6R6 833 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 H3BMH7 237 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SGK494L7N484 410 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 HMGN4O00479 90 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 ACOX3O15254 700 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 CLOCKO15516 846 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 FOXS1O43638 330 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 RDH16O75452 317 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 CFIP05156 583 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 ALPPL2P10696 532 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 CKMT2P17540 419 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 PTGER1P34995 402 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 GPC1P35052 558 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 PRIM2P49643 509 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 RAB38P57729 211 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SHC2P98077 582 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 CDK6Q00534 326 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 TP53BP2Q13625 1128 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 FAM53BQ14153 422 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 ELOAQ14241 798 aaKnown RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 MYBPC3Q14896 1274 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 GPR19Q15760 415 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 GARNL3Q5VVW2 1013 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 TNFAIP8L2Q6P589 184 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 TLDC1Q6P9B6 456 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 WDR74Q6RFH5 385 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 CEACAM20Q6UY09 585 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 USP53Q70EK8 1073 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 PRSS42Q7Z5A4 293 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SLC30A8Q8IWU4 369 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 LRRC25Q8N386 305 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 FAM181AQ8N9Y4 354 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 ICA1LQ8NDH6 482 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 TMEM52Q8NDY8 209 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 OR4K14Q8NGD5 310 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 OR9A2Q8NGT5 310 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 OR9A4Q8NGU2 314 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 NFKBIDQ8NI38 313 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 CEP76Q8TAP6 659 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 MOAP1Q96BY2 351 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SLC41A2Q96JW4 573 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SLC29A1Q99808 456 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 GAREM1Q9H706 876 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 COQ10BQ9H8M1 238 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 ZCCHC3Q9NUD5 404 aaKnown RBP8.89□□□□□ -0.99
SF3B1-211ENST00000487698 TMEM9Q9P0T7 183 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 OAZ3Q9UMX2 235 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 SPACA6W5XKT8 324 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 FER1L5A0AVI2 2057 aa8.89□□□□□ -0.99
SF3B1-211ENST00000487698 MYO15AQ9UKN7 3530 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 NUP210LQ5VU65 1888 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 VPS13AQ96RL7 3174 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 SAC3D1A6NKF1 404 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms