RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 NCKAP5O14513 1909 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 ARHGAP21Q5T5U3 1957 aa17.87■□□□□ 0.45
SMPDL3A-202ENST00000487215 C15orf38-AP3S2A0A0A6YYH1 394 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 AHRRA9YTQ3 701 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 CES2O00748 559 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 SH3BGRLO75368 114 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 STK16O75716 305 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 WISP3O95389 354 aaPredicted RBP17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 FBXO45P0C2W1 286 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 EPORP19235 508 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 MSH2P43246 934 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 CRYZQ08257 329 aaKnown RBP17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 DUSP8Q13202 625 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 LAPTM5Q13571 262 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 KEAP1Q14145 624 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 MORF4L2Q15014 288 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 PDK4Q16654 411 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 PAGE2BQ5JRK9 111 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 FBXW10Q5XX13 1052 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 MAATS1Q7Z4T9 603 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 LACC1Q8IV20 430 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 DND1Q8IYX4 353 aaKnown RBP17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 SPATA6LQ8N4H0 392 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 C7orf57Q8NEG2 295 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 DOK4Q8TEW6 326 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 ZNF473Q8WTR7 871 aaKnown RBP17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 FBXL20Q96IG2 436 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 DOHHQ9BU89 302 aa17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 ZNF629Q9UEG4 869 aaPredicted RBP17.86■□□□□ 0.45
SMPDL3A-202ENST00000487215 A0A1B0GTL3 188 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 TUBAL3A6NHL2 446 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 ZSCAN12O43309 604 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 DYRK3O43781 588 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 GDF1P27539 372 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 TIMP3P35625 211 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 SSR2P43308 183 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 ZNF136P52737 540 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 PLIN5Q00G26 463 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 IRF8Q02556 426 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 CHIT1Q13231 466 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 TMEM35AQ53FP2 167 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 SULT1C3Q6IMI6 304 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 Q71RC1 249 aaPredicted RBP17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 GPSM1Q86YR5 675 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 ANKMY2Q8IV38 441 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 BBOF1Q8ND07 529 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 RBM18Q96H35 190 aaKnown RBP17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 ART5Q96L15 291 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 GAL3ST4Q96RP7 486 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 MCMBPQ9BTE3 642 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 RHOJQ9H4E5 214 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 MOCS1Q9NZB8 636 aa17.85■□□□□ 0.45
SMPDL3A-202ENST00000487215 SAP18O00422 153 aaKnown RBP17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 TRIM3O75382 744 aaPredicted RBP17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 TGFB1P01137 390 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 C1QAP02745 245 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 EPXP11678 715 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 SERPINB3P29508 390 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 HERVK_113P63132 956 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 ERVK-8P63133 956 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 OR4D1Q15615 310 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 TBCCQ15814 346 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 HIST2H2ACQ16777 129 aaPredicted RBP17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 AP5B1Q2VPB7 878 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 CDKL4Q5MAI5 379 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 HIST2H2AA3Q6FI13 130 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 C18orf12Q96KH6 178 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 ZNF597Q96LX8 424 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 KRT12Q99456 494 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 TIMP4Q99727 224 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 SORBS1Q9BX66 1292 aaKnown RBP17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 ERVK-6Q9BXR3 956 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 PHACTR1Q9C0D0 580 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 WWTR1Q9GZV5 400 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 RPF2Q9H7B2 306 aaKnown RBP17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 PLEKHF2Q9H8W4 249 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 CAB39LQ9H9S4 337 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 PRM3Q9NNZ6 103 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 ERVK-19Q9WJR5 959 aa17.84■□□□□ 0.45
SMPDL3A-202ENST00000487215 CCNT2O60583 730 aaKnown RBP17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 IL2RAP01589 272 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 ALOX15P16050 662 aaPredicted RBP17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 HOXC12P31275 282 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 SLC12A2P55011 1212 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 SLAMF1Q13291 335 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 E2F2Q14209 437 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 EBPQ15125 230 aaKnown RBP17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 NTRK2Q16620 822 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 SLC29A4Q7RTT9 530 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 KIF18BQ86Y91 864 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 PDPRQ8NCN5 879 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 LINC01560Q8TB33 94 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 HSPBAP1Q96EW2 488 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 PRDM14Q9GZV8 571 aa17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 PTBP2Q9UKA9 531 aaKnown RBP17.83■□□□□ 0.44
SMPDL3A-202ENST00000487215 IQANK1A0A1B0GTG1 560 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 PRKRAO75569 313 aaKnown RBP17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 PIAS1O75925 651 aa17.82■□□□□ 0.44
SMPDL3A-202ENST00000487215 CCDC166P0CW27 439 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms