RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CXCL14O95715 111 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 EPOP01588 193 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 TYMPP19971 482 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 FEN1P39748 380 aaKnown RBP4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 SLC6A12P48065 614 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 TNFSF10P50591 281 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 TMEM187Q14656 261 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 TMEM30BQ3MIR4 351 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 CCDC92Q53HC0 331 aaPredicted RBP4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 SNRNP48Q6IEG0 339 aaKnown RBP4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 Q6ZVQ6 151 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 ZNF619Q8N2I2 560 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 SIDT2Q8NBJ9 832 aaKnown RBP4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 OR4A16Q8NH70 328 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 GPR148Q8TDV2 347 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 UBTD2Q8WUN7 234 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 DTD2Q96FN9 168 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 ZNF274Q96GC6 653 aaPredicted RBP4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 DUX3Q96PT4 197 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 RUFY1Q96T51 708 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 NAP1L3Q99457 506 aaPredicted RBP4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 CCM2Q9BSQ5 444 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 PAPOLGQ9BWT3 736 aaKnown RBP4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 DGCR6LQ9BY27 220 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 HOXD1Q9GZZ0 328 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 TNMDQ9H2S6 317 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 GPN1Q9HCN4 374 aaPredicted RBP4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 KCNMB3Q9NPA1 279 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 SCRT2Q9NQ03 307 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 FAM212BQ9NTI7 297 aaPredicted RBP4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 CACNG5Q9UF02 275 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 UBQLN2Q9UHD9 624 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 ERVK-19Q9WJR5 959 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 STRAPQ9Y3F4 350 aaKnown RBP4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 CSNK1G3Q9Y6M4 447 aa4.26□□□□□ -1.73
PRPF38A-203ENST00000487160 RNF123Q5XPI4 1314 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 MYH15Q9Y2K3 1946 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 SLC28A1O00337 649 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 SIGLEC5O15389 551 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 P2RX6O15547 441 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 GRID2O43424 1007 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 NXPH2O95156 264 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 CPNE6O95741 557 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 IGLV1-44P01699 117 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 GSTA2P09210 222 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 MMP10P09238 476 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 CYP3A5P20815 502 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 C4BPBP20851 252 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 GIFP27352 417 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 MMP12P39900 470 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 TSFMP43897 325 aaKnown RBP4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 GABPAQ06546 454 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 C3AR1Q16581 482 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 STX1AQ16623 288 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 FER1L6Q2WGJ9 1857 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 HLA-BQ31612 363 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 CES4AQ5XG92 561 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 CYP4V2Q6ZWL3 525 aaPredicted RBP4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 ZNF329Q86UD4 541 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 CATSPERDQ86XM0 798 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 DND1Q8IYX4 353 aaKnown RBP4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 SLC22A15Q8IZD6 547 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 RPLP0P6Q8NHW5 317 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 GANCQ8TET4 914 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 CHURC1Q8WUH1 139 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 PRCCQ92733 491 aaPredicted RBP4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 ZNF300Q96RE9 604 aaPredicted RBP4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 SPXQ9BT56 116 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 TEX13AQ9BXU3 409 aaPredicted RBP4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 ABCG8Q9H221 673 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 FNDC4Q9H6D8 234 aaPredicted RBP4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 VIPAS39Q9H9C1 493 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 SPHK2Q9NRA0 654 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 PLEK2Q9NYT0 353 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 ZNF319Q9P2F9 582 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 RPH3AQ9Y2J0 694 aaPredicted RBP4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 RAB3GAP2Q9H2M9 1393 aa4.25□□□□□ -1.73
PRPF38A-203ENST00000487160 THSD7BQ9C0I4 1608 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 EVC2Q86UK5 1308 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 ANKRD26Q9UPS8 1709 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 SCN4AP35499 1836 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 TRBV2A0A0J9YWF9 115 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 CCDC69A6NI79 296 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 TCP10L2B9ZVM9 353 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 B4GAT1O43505 415 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 HSF2BPO75031 334 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 ATP6V1G1O75348 118 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 SEC22BO75396 215 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 ZNF821O75541 412 aaPredicted RBP4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 CEACAM4O75871 244 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 IGKV3-20P01619 116 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 RPLP0P05388 317 aaKnown RBP4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 ANPEPP15144 967 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 AREGP15514 252 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 DPEP1P16444 411 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 AHCYP23526 432 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 CNN1P51911 297 aaKnown RBP4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 BACE1P56817 501 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 STARD6P59095 220 aa4.24□□□□□ -1.73
PRPF38A-203ENST00000487160 IRX4P78413 519 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms