RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 PCDHGA6Q9Y5G7 932 aa16.49■□□□□ 0.23
CHMP3-207ENST00000485465 MYOCOSA0A1B0GUC4 107 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 A0A1W2PS29 197 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 MYO1GB0I1T2 1018 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 NR5A2O00482 541 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 PDPK1O15530 556 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 ALOX12BO75342 701 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 PGRP06401 933 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 UMODP07911 640 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 CPMP14384 443 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 PORP16435 677 aaPredicted RBP16.48■□□□□ 0.23
CHMP3-207ENST00000485465 CSNK2A2P19784 350 aaPredicted RBP16.48■□□□□ 0.23
CHMP3-207ENST00000485465 FEN1P39748 380 aaKnown RBP16.48■□□□□ 0.23
CHMP3-207ENST00000485465 WNT3P56703 355 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 PCBP4P57723 403 aaKnown RBP16.48■□□□□ 0.23
CHMP3-207ENST00000485465 RPS18P62269 152 aaKnown RBP16.48■□□□□ 0.23
CHMP3-207ENST00000485465 NSDHLQ15738 373 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 CEBPEQ15744 281 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 TREML1Q86YW5 311 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 FITM2Q8N6M3 262 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 KIAA1143Q96AT1 154 aaPredicted RBP16.48■□□□□ 0.23
CHMP3-207ENST00000485465 ERP27Q96DN0 273 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 SPDL1Q96EA4 605 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 BBS4Q96RK4 519 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 SLC52A3Q9NQ40 469 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 ANGPTL2Q9UKU9 493 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 SEC16AO15027 2179 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 NUP210LQ5VU65 1888 aa16.48■□□□□ 0.23
CHMP3-207ENST00000485465 TCRBV16S1A1N1A0A5B0 115 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 DYTNA2CJ06 578 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 SYNDIG1LA6NDD5 238 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 CCDC154A6NI56 674 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 CAPN14A8MX76 684 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 CFLARO15519 480 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 SCN2BO60939 215 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 SNRPB2P08579 225 aaKnown RBP16.47■□□□□ 0.23
CHMP3-207ENST00000485465 SLC35E2P0CK97 266 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 NTSP30990 170 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 MPIP34949 423 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 FRKP42685 505 aaPredicted RBP16.47■□□□□ 0.23
CHMP3-207ENST00000485465 DUSP2Q05923 314 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 CLN3Q13286 438 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 MAPRE2Q15555 327 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 VPS26BQ4G0F5 336 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 TIGD2Q4W5G0 525 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 ANXA8L1Q5VT79 327 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 FAM91A1Q658Y4 838 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 FAAH2Q6GMR7 532 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 TMEM205Q6UW68 189 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 CCDC116Q8IYX3 515 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 LRRC25Q8N386 305 aaPredicted RBP16.47■□□□□ 0.23
CHMP3-207ENST00000485465 TSPEARQ8WU66 669 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 METTL21AQ8WXB1 218 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 VPS33AQ96AX1 596 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 OR52E6Q96RD3 313 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 GPN2Q9H9Y4 310 aaPredicted RBP16.47■□□□□ 0.23
CHMP3-207ENST00000485465 SLAMF7Q9NQ25 335 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 SEMA3GQ9NS98 782 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 ACSS1Q9NUB1 689 aaPredicted RBP16.47■□□□□ 0.23
CHMP3-207ENST00000485465 FAM120CQ9NX05 1096 aaKnown RBP16.47■□□□□ 0.23
CHMP3-207ENST00000485465 DKK4Q9UBT3 224 aa16.47■□□□□ 0.23
CHMP3-207ENST00000485465 PRSS51A0A1B0GVH4 220 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 A0A1W2PRB8 838 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 RNASET2O00584 256 aaKnown RBP16.46■□□□□ 0.23
CHMP3-207ENST00000485465 TLX3O43711 291 aaPredicted RBP16.46■□□□□ 0.23
CHMP3-207ENST00000485465 IGHEP01854 428 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 LIFP15018 202 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 CAPN3P20807 821 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 EFNA1P20827 205 aaPredicted RBP16.46■□□□□ 0.23
CHMP3-207ENST00000485465 STT3AP46977 705 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 NCBP2P52298 156 aaKnown RBP eCLIP16.46■□□□□ 0.231e-8■□□□□ 11.3
CHMP3-207ENST00000485465 SSPNQ14714 243 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 TERF2Q15554 542 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 CPZQ66K79 652 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 MSANTD1Q6ZTZ1 278 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 LANCL3Q6ZV70 420 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 ANKRD37Q7Z713 158 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 ST13P4Q8IZP2 240 aaPredicted RBP16.46■□□□□ 0.23
CHMP3-207ENST00000485465 VPS37AQ8NEZ2 397 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 SUN3Q8TAQ9 357 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 GATA6Q92908 595 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 PPWD1Q96BP3 646 aaKnown RBP16.46■□□□□ 0.23
CHMP3-207ENST00000485465 ZBED6CLQ96FA7 236 aaPredicted RBP16.46■□□□□ 0.23
CHMP3-207ENST00000485465 AMDHD1Q96NU7 426 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 DGAT2Q96PD7 388 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 PELOQ9BRX2 385 aaKnown RBP16.46■□□□□ 0.23
CHMP3-207ENST00000485465 EFHD1Q9BUP0 239 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 SLC25A23Q9BV35 468 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 GLIPR2Q9H4G4 154 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 IL17BQ9UHF5 180 aa16.46■□□□□ 0.23
CHMP3-207ENST00000485465 LOC100653049A0A140TA62 436 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 A0A1W2PP18 115 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 ASPDHA6ND91 283 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 PCDH17O14917 1159 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 OR10H2O60403 315 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 KRT34O76011 436 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 IFNA16P05015 189 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 ATP1B1P05026 303 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 COX4I1P13073 169 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 MMP11P24347 488 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms